RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 ATXN3LQ9H3M9 355 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 VAV3Q9UKW4 847 aa9.02□□□□□ -0.97
CHD1-204ENST00000505982 DBX1A6NMT0 343 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 TMPRSS2O15393 492 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 CD8BP10966 210 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 NASPP49321 788 aaPredicted RBP9.01□□□□□ -0.97
CHD1-204ENST00000505982 HNRNPUQ00839 825 aaKnown RBP eCLIP9.01□□□□□ -0.97
CHD1-204ENST00000505982 LMNB2Q03252 620 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 DIEXFQ68CQ4 756 aaKnown RBP9.01□□□□□ -0.97
CHD1-204ENST00000505982 AGMOQ6ZNB7 445 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 EAF1Q96JC9 268 aaPredicted RBP9.01□□□□□ -0.97
CHD1-204ENST00000505982 HIRIP3Q9BW71 556 aaPredicted RBP9.01□□□□□ -0.97
CHD1-204ENST00000505982 RC3H2Q9HBD1 1191 aaKnown RBP9.01□□□□□ -0.97
CHD1-204ENST00000505982 CBX8Q9HC52 389 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 CRIM1Q9NZV1 1036 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 EFR3BQ9Y2G0 817 aa9.01□□□□□ -0.97
CHD1-204ENST00000505982 LIG1P18858 919 aa9□□□□□ -0.97
CHD1-204ENST00000505982 TFE3P19532 575 aaPredicted RBP9□□□□□ -0.97
CHD1-204ENST00000505982 RPS26P62854 115 aaKnown RBP9□□□□□ -0.97
CHD1-204ENST00000505982 PRKCQQ04759 706 aa9□□□□□ -0.97
CHD1-204ENST00000505982 APOBRQ0VD83 1088 aa9□□□□□ -0.97
CHD1-204ENST00000505982 CDK5R2Q13319 367 aa9□□□□□ -0.97
CHD1-204ENST00000505982 PKN1Q16512 942 aa9□□□□□ -0.97
CHD1-204ENST00000505982 FAM168AQ92567 244 aa9□□□□□ -0.97
CHD1-204ENST00000505982 SEC16BQ96JE7 1060 aa9□□□□□ -0.97
CHD1-204ENST00000505982 NT5C1AQ9BXI3 368 aa9□□□□□ -0.97
CHD1-204ENST00000505982 LNPKQ9C0E8 428 aa9□□□□□ -0.97
CHD1-204ENST00000505982 UBP1Q9NZI7 540 aa9□□□□□ -0.97
CHD1-204ENST00000505982 ID3Q02535 119 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 ZNF124Q15973 351 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 FAM181AQ8N9Y4 354 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 PI4K2BQ8TCG2 481 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 FANCD2OSQ96PS1 177 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 MIR1-1HGQ9H1L0 117 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 MKNK2Q9HBH9 465 aa8.99□□□□□ -0.97
CHD1-204ENST00000505982 RNASE1P07998 156 aaKnown RBP8.98□□□□□ -0.97
CHD1-204ENST00000505982 NME2P22392 152 aa8.98□□□□□ -0.97
CHD1-204ENST00000505982 ARHGAP27Q6ZUM4 889 aa8.98□□□□□ -0.97
CHD1-204ENST00000505982 SULF2Q8IWU5 870 aa8.98□□□□□ -0.97
CHD1-204ENST00000505982 SMYD4Q8IYR2 804 aaPredicted RBP8.98□□□□□ -0.97
CHD1-204ENST00000505982 CPLX3Q8WVH0 158 aa8.98□□□□□ -0.97
CHD1-204ENST00000505982 JARID2Q92833 1246 aaPredicted RBP8.98□□□□□ -0.97
CHD1-204ENST00000505982 NKD1Q969G9 470 aa8.98□□□□□ -0.97
CHD1-204ENST00000505982 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
CHD1-204ENST00000505982 GARTP22102 1010 aa8.97□□□□□ -0.97
CHD1-204ENST00000505982 LRRC14Q15048 493 aa8.97□□□□□ -0.97
CHD1-204ENST00000505982 IFI16Q16666 785 aaKnown RBP8.97□□□□□ -0.97
CHD1-204ENST00000505982 SOGA3Q5TF21 947 aa8.97□□□□□ -0.97
CHD1-204ENST00000505982 KSR1Q8IVT5 923 aa8.97□□□□□ -0.97
CHD1-204ENST00000505982 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
CHD1-204ENST00000505982 CCDC86Q9H6F5 360 aaKnown RBP8.97□□□□□ -0.97
CHD1-204ENST00000505982 KCNQ5Q9NR82 932 aa8.97□□□□□ -0.97
CHD1-204ENST00000505982 MBNL3Q9NUK0 354 aaKnown RBP8.97□□□□□ -0.97
CHD1-204ENST00000505982 PCDHB5Q9Y5E4 795 aa8.97□□□□□ -0.97
CHD1-204ENST00000505982 TLR3O15455 904 aaKnown RBP8.96□□□□□ -0.98
CHD1-204ENST00000505982 GREM1O60565 184 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 RNGTTO60942 597 aaKnown RBP8.96□□□□□ -0.98
CHD1-204ENST00000505982 COL9A2Q14055 689 aaPredicted RBP8.96□□□□□ -0.98
CHD1-204ENST00000505982 AOC3Q16853 763 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 LLGL2Q6P1M3 1020 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 FAM196AQ6ZSG2 479 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 CKAP2LQ8IYA6 745 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 SLC38A3Q99624 504 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 EMILIN2Q9BXX0 1053 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 ZC3H12CQ9C0D7 883 aaKnown RBP8.96□□□□□ -0.98
CHD1-204ENST00000505982 CYP8B1Q9UNU6 501 aa8.96□□□□□ -0.98
CHD1-204ENST00000505982 TMEM265A0A087WTH1 108 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 SMARCA5O60264 1052 aaPredicted RBP8.95□□□□□ -0.98
CHD1-204ENST00000505982 BMP6P22004 513 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 SEPT6Q14141 434 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 SEZ6Q53EL9 994 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 BNC2Q6ZN30 1099 aaPredicted RBP8.95□□□□□ -0.98
CHD1-204ENST00000505982 HRASLS5Q96KN8 279 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 KRTAP4-9Q9BYQ8 210 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 DISC1Q9NRI5 854 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 KRT82Q9NSB4 513 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 ADAMTS6Q9UKP5 1117 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 PCOLCE2Q9UKZ9 415 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 STRIP2Q9ULQ0 834 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 MRVI1Q9Y6F6 885 aa8.95□□□□□ -0.98
CHD1-204ENST00000505982 ZNF862O60290 1169 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 BPNT1O95861 308 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 F13A1P00488 732 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 ARNTP27540 789 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 MCM4P33991 863 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 CRKP46108 304 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 RBL2Q08999 1139 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 TTLL4Q14679 1199 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 FBLN7Q53RD9 439 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 LRRN4CLQ8ND94 238 aa8.94□□□□□ -0.98
CHD1-204ENST00000505982 CEACAM5P06731 702 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 GSTP1P09211 210 aaKnown RBP8.93□□□□□ -0.98
CHD1-204ENST00000505982 CD96P40200 585 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 SOX9P48436 509 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 CWF19L2Q2TBE0 894 aaKnown RBP8.93□□□□□ -0.98
CHD1-204ENST00000505982 RASIP1Q5U651 963 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms