RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 IDH1O75874 414 aaKnown RBP13.9□□□□□ -0.18
SIL1-208ENST00000505945 GDF11O95390 407 aa13.9□□□□□ -0.18
SIL1-208ENST00000505945 MIER1Q8N108 512 aa13.9□□□□□ -0.18
SIL1-208ENST00000505945 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
SIL1-208ENST00000505945 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
SIL1-208ENST00000505945 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
SIL1-208ENST00000505945 GJD2Q9UKL4 321 aa13.9□□□□□ -0.18
SIL1-208ENST00000505945 NDUFB9Q9Y6M9 179 aa13.9□□□□□ -0.18
SIL1-208ENST00000505945 RANBP2P49792 3224 aaKnown RBP13.89□□□□□ -0.19
SIL1-208ENST00000505945 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
SIL1-208ENST00000505945 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
SIL1-208ENST00000505945 IRX3P78415 501 aaPredicted RBP13.89□□□□□ -0.19
SIL1-208ENST00000505945 MIGA1Q8NAN2 632 aa13.89□□□□□ -0.19
SIL1-208ENST00000505945 RBM27Q9P2N5 1060 aaKnown RBP13.89□□□□□ -0.19
SIL1-208ENST00000505945 MORF4L1Q9UBU8 362 aa13.89□□□□□ -0.19
SIL1-208ENST00000505945 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 IGSF3O75054 1194 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 HLA-DOAP06340 250 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 HOXA7P31268 230 aaPredicted RBP13.88□□□□□ -0.19
SIL1-208ENST00000505945 TRIM32Q13049 653 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 CEP85Q6P2H3 762 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 MAGEB6Q8N7X4 407 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 CRISPLD2Q9H0B8 497 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
SIL1-208ENST00000505945 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 TXNRD2Q9NNW7 524 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 EXOC6BQ9Y2D4 811 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 NR2E3Q9Y5X4 410 aa13.88□□□□□ -0.19
SIL1-208ENST00000505945 GH2P01242 217 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 HMGCRP04035 888 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 USP5P45974 858 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 HERVK_113P62684 666 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 AACSQ86V21 672 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 GPRC5AQ8NFJ5 357 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 PAWRQ96IZ0 340 aaKnown RBP13.87□□□□□ -0.19
SIL1-208ENST00000505945 EMILIN3Q9NT22 766 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 GINM1Q9NU53 330 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 FOCADQ5VW36 1801 aa13.87□□□□□ -0.19
SIL1-208ENST00000505945 EVI5O60447 810 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 CAPN2P17655 700 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 CYP2B6P20813 491 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 MAP3K12Q12852 859 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 Q3C1V9 767 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 HMX1Q9NP08 348 aaPredicted RBP13.86□□□□□ -0.19
SIL1-208ENST00000505945 IL1RAPL2Q9NP60 686 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
SIL1-208ENST00000505945 ZYXQ15942 572 aaKnown RBP13.85□□□□□ -0.19
SIL1-208ENST00000505945 TATDN1Q6P1N9 297 aa13.85□□□□□ -0.19
SIL1-208ENST00000505945 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
SIL1-208ENST00000505945 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
SIL1-208ENST00000505945 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
SIL1-208ENST00000505945 TRIB2Q92519 343 aa13.85□□□□□ -0.19
SIL1-208ENST00000505945 SZT2Q5T011 3432 aa13.85□□□□□ -0.19
SIL1-208ENST00000505945 MYH1P12882 1939 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 TTC6Q86TZ1 520 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 CERS3Q8IU89 383 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 PAGR1Q9BTK6 254 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 PORCNQ9H237 461 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 PRO3102Q9H379 93 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 PLXNB2O15031 1838 aa13.84□□□□□ -0.19
SIL1-208ENST00000505945 APBB1O00213 710 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 PLCD1P51178 756 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 ERVK-9P63128 1117 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 ERVK-24P63145 666 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 RAB3GAP1Q15042 981 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 CERKLQ49MI3 558 aaPredicted RBP13.83□□□□□ -0.2
SIL1-208ENST00000505945 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
SIL1-208ENST00000505945 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 FEZ1Q99689 392 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
SIL1-208ENST00000505945 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 EHD4Q9H223 541 aa13.83□□□□□ -0.2
SIL1-208ENST00000505945 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
SIL1-208ENST00000505945 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
SIL1-208ENST00000505945 MAPK4P31152 587 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 PDE3AQ14432 1141 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 HSP90AB4PQ58FF6 505 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 SLC9C2Q5TAH2 1124 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
SIL1-208ENST00000505945 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 ACER1Q8TDN7 264 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 STAP2Q9UGK3 403 aa13.82□□□□□ -0.2
SIL1-208ENST00000505945 MAGEB6P1A0A0J9YX57 407 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L15C9J2P7 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L13C9JLJ4 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L11C9JVI0 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L18D6R9N7 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L22D6RA61 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L17D6RBQ6 530 aa13.81□□□□□ -0.2
SIL1-208ENST00000505945 USP17L19D6RCP7 530 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms