RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 GDF11O95390 407 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 HOXA7P31268 230 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 IRX3P78415 501 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 TTC6Q86TZ1 520 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 ZBTB40Q9NUA8 1239 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 ZBTB21Q9ULJ3 1066 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 COG6Q9Y2V7 657 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 ZSWIM8A7E2V4 1837 aa14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 JAG1P78504 1218 aa14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 SHISA4Q96DD7 197 aa14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 EHD4Q9H223 541 aa14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 SERPINB13Q9UIV8 391 aa14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 TAOK2Q9UL54 1235 aa14.65□□□□□ -0.06
PDLIM7-214ENST00000505746 APBB1O00213 710 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 SGPL1O95470 568 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 INHAP05111 366 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 ELNP15502 786 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 SLC9C2Q5TAH2 1124 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 TATDN1Q6P1N9 297 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 U2AF1L4Q8WU68 220 aaKnown RBP14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 UNC93B1Q9H1C4 597 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 MORF4L1Q9UBU8 362 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 RCAN3Q9UKA8 241 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 MAST2Q6P0Q8 1798 aa14.64□□□□□ -0.07
PDLIM7-214ENST00000505746 MAGEB6P1A0A0J9YX57 407 aa14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 GH2P01242 217 aa14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 HABP4Q5JVS0 413 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 GTF3C2Q8WUA4 911 aaPredicted RBP14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 DPF3Q92784 378 aa14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 P2RX7Q99572 595 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 RIOK1Q9BRS2 568 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 HTATIP2Q9BUP3 242 aa14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 CRNKL1Q9BZJ0 848 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
PDLIM7-214ENST00000505746 PHIPQ8WWQ0 1821 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 GOLIM4O00461 696 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 PDE6AP16499 860 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 HERVK_113P62684 666 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 SHROOM1Q2M3G4 852 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 CERKLQ49MI3 558 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 SIRT2Q8IXJ6 389 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 GPRC5AQ8NFJ5 357 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 DNAJC2Q99543 621 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 CABP5Q9NP86 173 aa14.62□□□□□ -0.07
PDLIM7-214ENST00000505746 MKI67P46013 3256 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 TFRCP02786 760 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 USP14P54578 494 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 RAB3GAP1Q15042 981 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 ABCB5Q2M3G0 1257 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 UBE2Q1Q7Z7E8 422 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 FEZ1Q99689 392 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 EMILIN3Q9NT22 766 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 GJD2Q9UKL4 321 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 BRCA2P51587 3418 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 ZNF532Q9HCE3 1301 aa14.61□□□□□ -0.07
PDLIM7-214ENST00000505746 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 H0YGN5 161 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 FARP2O94887 1054 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 HMGCRP04035 888 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 MAPK4P31152 587 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 PLCD1P51178 756 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 C12orf42Q96LP6 360 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 DEFB118Q96PH6 123 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 PAK6Q9NQU5 681 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 MCM9Q9NXL9 1143 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 RBPJLQ9UBG7 517 aa14.6□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 ATP5JP18859 108 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 ERVK-9P63128 1117 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 ERVK-24P63145 666 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 SOCS4Q8WXH5 440 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.59□□□□□ -0.075e-9■■□□□ 13.9
PDLIM7-214ENST00000505746 KIAA1683Q9H0B3 1180 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 BOLA2Q9H3K6 86 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 TXNRD2Q9NNW7 524 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 PAG1Q9NWQ8 432 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 LOC285556D6RIA3 1793 aa14.59□□□□□ -0.07
PDLIM7-214ENST00000505746 TCRBV5S4A2TA0A5A2 114 aa14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 SHMT1P34896 483 aa14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 ZYXQ15942 572 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
PDLIM7-214ENST00000505746 CRISPLD2Q9H0B8 497 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms