RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 COL6A1P12109 1028 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 USP14P54578 494 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 ERVK-24P63145 666 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 CACNB2Q08289 660 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-210ENST00000505589 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.465e-10■□□□□ 9.7
NEDD9-210ENST00000505589 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 DOCK2Q92608 1830 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
NEDD9-210ENST00000505589 ZNF521Q96K83 1311 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 ADORA1P30542 326 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 PPP4CP60510 307 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
NEDD9-210ENST00000505589 MTMR2Q13614 643 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 CCDC158Q5M9N0 1113 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 Q7L0L9 218 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 GPR142Q7Z601 462 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-210ENST00000505589 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEDD9-210ENST00000505589 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
NEDD9-210ENST00000505589 APBA2Q99767 749 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 RBPJLQ9UBG7 517 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 IVNS1ABPQ9Y6Y0 642 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 DOCK1Q14185 1865 aa12.17□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L15C9J2P7 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L13C9JLJ4 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L11C9JVI0 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L18D6R9N7 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L22D6RA61 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L17D6RBQ6 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L19D6RCP7 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L20D6RJB6 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 SLFN5Q08AF3 891 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP17L24Q0WX57 530 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 TFCP2Q12800 502 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 TRIM32Q13049 653 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 MORN1Q5T089 497 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 LHX8Q68G74 356 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-210ENST00000505589 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-210ENST00000505589 METTL16Q86W50 562 aaKnown RBP12.16□□□□□ -0.46
NEDD9-210ENST00000505589 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 LPAR1Q92633 364 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 USP6NLQ92738 828 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-210ENST00000505589 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
NEDD9-210ENST00000505589 PA2G4Q9UQ80 394 aaKnown RBP12.16□□□□□ -0.46
NEDD9-210ENST00000505589 PFASO15067 1338 aa12.15□□□□□ -0.46
NEDD9-210ENST00000505589 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
NEDD9-210ENST00000505589 STRNO43815 780 aa12.15□□□□□ -0.46
NEDD9-210ENST00000505589 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-210ENST00000505589 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-210ENST00000505589 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-210ENST00000505589 NOB1Q9ULX3 412 aaKnown RBP12.15□□□□□ -0.46
NEDD9-210ENST00000505589 PTPRFP10586 1907 aa12.15□□□□□ -0.46
NEDD9-210ENST00000505589 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 DNM1LO00429 736 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
NEDD9-210ENST00000505589 CNGA1P29973 690 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 MTX1Q13505 466 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 LRRC26Q2I0M4 334 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 Q3C1V9 767 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 PAGR1Q9BTK6 254 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 CABP5Q9NP86 173 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEDD9-210ENST00000505589 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-210ENST00000505589 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
NEDD9-210ENST00000505589 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 PTPREP23469 700 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 CCND3P30281 292 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-210ENST00000505589 TBC1D9Q6ZT07 1266 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 C12orf42Q96LP6 360 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 TXNRD2Q9NNW7 524 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 DDX20Q9UHI6 824 aaKnown RBP12.13□□□□□ -0.47
NEDD9-210ENST00000505589 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
NEDD9-210ENST00000505589 GNAI2P04899 355 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 HOXC6P09630 235 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 WDR78Q5VTH9 848 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 DPP9Q86TI2 863 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
NEDD9-210ENST00000505589 FEZ1Q99689 392 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 PORCNQ9H237 461 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
NEDD9-210ENST00000505589 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
NEDD9-210ENST00000505589 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
NEDD9-210ENST00000505589 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
NEDD9-210ENST00000505589 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms