RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 DOCK2Q92608 1830 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 MYH2Q9UKX2 1941 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 USP17L10C9JJH3 530 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 ASNSP08243 561 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 UBTFL1P0CB47 393 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 CNGA1P29973 690 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 JAG1P78504 1218 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 NSUN4Q96CB9 384 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 APBA2Q99767 749 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 NDUFB9Q9Y6M9 179 aa14.31□□□□□ -0.12
CCHCR1-219ENST00000505392 DNAH12Q6ZR08 3092 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 EYSQ5T1H1 3165 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 MFSD14CQ5VZR4 134 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 POTEEQ6S8J3 1075 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 TEX11Q8IYF3 940 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 NEUROD6Q96NK8 337 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 COPRSQ9NQ92 184 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 RAI14Q9P0K7 980 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 HMG20BQ9P0W2 317 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 DDX20Q9UHI6 824 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
CCHCR1-219ENST00000505392 MYH13Q9UKX3 1938 aa14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 MVPQ14764 893 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 SH3RF3Q8TEJ3 882 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 GTF3C2Q8WUA4 911 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 MYLIPQ8WY64 445 aa14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 LPAR1Q92633 364 aa14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 DHX36Q9H2U1 1008 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 FLRT1Q9NZU1 646 aa14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 COL2A1P02458 1487 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-219ENST00000505392 PLXNB2O15031 1838 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 MSCO60682 206 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 GLRX3O76003 335 aaKnown RBP14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 GDF11O95390 407 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 RTP1P59025 263 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 TFCP2Q12800 502 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 SHROOM1Q2M3G4 852 aaPredicted RBP14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 C9orf50Q5SZB4 431 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 WDR78Q5VTH9 848 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 PI16Q6UXB8 463 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 SPATA5Q8NB90 893 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 SYMPKQ92797 1274 aaKnown RBP14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 ATP11BQ9Y2G3 1177 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 PRUNE2Q8WUY3 3088 aa14.28□□□□□ -0.12
CCHCR1-219ENST00000505392 DNM1LO00429 736 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 GJC2Q5T442 439 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L2Q6R6M4 530 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 CRACR2BQ8N4Y2 399 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 TGFBRAP1Q8WUH2 860 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 BADQ92934 168 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 NOL10Q9BSC4 688 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 TRIM34Q9BYJ4 488 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 PRDM5Q9NQX1 630 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 LRP2BPQ9P2M1 347 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
CCHCR1-219ENST00000505392 CNMDO75829 334 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 BAG3O95817 575 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 FOSL2P15408 326 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 PTPREP23469 700 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 CYP2C19P33261 490 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 CCNA1P78396 465 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 SLC39A5Q6ZMH5 540 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 MAPKAPK5Q8IW41 473 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 GINM1Q9NU53 330 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 PALD1Q9ULE6 856 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 LOC285556D6RIA3 1793 aa14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 SPTBN5Q9NRC6 3674 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-219ENST00000505392 SLC15A5A6NIM6 579 aa14.25□□□□□ -0.13
CCHCR1-219ENST00000505392 METTL16Q86W50 562 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-219ENST00000505392 ARRDC4Q8NCT1 418 aa14.25□□□□□ -0.13
CCHCR1-219ENST00000505392 TRPV1Q8NER1 839 aa14.25□□□□□ -0.13
CCHCR1-219ENST00000505392 NPLOC4Q8TAT6 608 aa14.25□□□□□ -0.13
CCHCR1-219ENST00000505392 ZBTB21Q9ULJ3 1066 aa14.25□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L15C9J2P7 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L13C9JLJ4 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L11C9JVI0 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L18D6R9N7 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L22D6RA61 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L17D6RBQ6 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L19D6RCP7 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L20D6RJB6 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 HOXC6P09630 235 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 COL9A1P20849 921 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 USP17L24Q0WX57 530 aa14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 ZYXQ15942 572 aaKnown RBP14.24□□□□□ -0.13
CCHCR1-219ENST00000505392 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms