RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 ESR2Q92731 530 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 TM6SF1Q9BZW5 370 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.14□□□□□ -0.47
RFC1-210ENST00000505077 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 SHMT1P34896 483 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 IREB2P48200 963 aaKnown RBP12.13□□□□□ -0.47
RFC1-210ENST00000505077 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 DNAJC18Q9H819 358 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
RFC1-210ENST00000505077 NEDD4P46934 1319 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
RFC1-210ENST00000505077 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
RFC1-210ENST00000505077 RASA1P20936 1047 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 MAP3K11Q16584 847 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
RFC1-210ENST00000505077 DYNLL2Q96FJ2 89 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 ZNF112Q9UJU3 913 aa12.12□□□□□ -0.47
RFC1-210ENST00000505077 ASNSP08243 561 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 MCM5P33992 734 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 EVX2Q03828 476 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 NBR1Q14596 966 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 SART3Q15020 963 aaKnown RBP12.11□□□□□ -0.47
RFC1-210ENST00000505077 CERKLQ49MI3 558 aaPredicted RBP12.11□□□□□ -0.47
RFC1-210ENST00000505077 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
RFC1-210ENST00000505077 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 ARMC9Q7Z3E5 817 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 MB21D2Q8IYB1 491 aaPredicted RBP12.11□□□□□ -0.47
RFC1-210ENST00000505077 SLC44A5Q8NCS7 719 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 KLRG1Q96E93 195 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 TCP11L1Q9NUJ3 509 aa12.11□□□□□ -0.47
RFC1-210ENST00000505077 SCAF8Q9UPN6 1271 aaKnown RBP12.11□□□□□ -0.47
RFC1-210ENST00000505077 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 PHF20L1A8MW92 1017 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 TRAF5O00463 557 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
RFC1-210ENST00000505077 KDM4AO75164 1064 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 CAP2P40123 477 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 MIGA2Q7L4E1 593 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.47
RFC1-210ENST00000505077 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
RFC1-210ENST00000505077 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 TAF6LQ9Y6J9 622 aa12.1□□□□□ -0.47
RFC1-210ENST00000505077 B4E1Z4 1266 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 USP2O75604 605 aaPredicted RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 PRDM1O75626 825 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 CASTP20810 708 aaKnown RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 RABEP1Q15276 862 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 PRAMEF18Q5VWM3 479 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 NEDD1Q8NHV4 660 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 GBA2Q9HCG7 927 aaPredicted RBP12.09□□□□□ -0.47
RFC1-210ENST00000505077 PICK1Q9NRD5 415 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 CSADQ9Y600 493 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 CYP46A1Q9Y6A2 500 aa12.09□□□□□ -0.47
RFC1-210ENST00000505077 ERICH2A1L162 156 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
RFC1-210ENST00000505077 RPS6KB1P23443 525 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 TFAP4Q01664 338 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 ADCK5Q3MIX3 580 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 RUFY3Q7L099 469 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 TTC14Q96N46 770 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 ZSCAN10Q96SZ4 725 aaPredicted RBP12.08□□□□□ -0.48
RFC1-210ENST00000505077 SH2D4AQ9H788 454 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 KANSL2Q9H9L4 492 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 ANGEL1Q9UNK9 670 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms