RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	DOCK2	Q92608	1830 aa		19.88	■□□□□ 0.77
DDR1-256	ENST00000505066	ELN	P15502	786 aa		19.88	■□□□□ 0.77
DDR1-256	ENST00000505066	RPAP2	Q8IXW5	612 aa	Predicted RBP	19.88	■□□□□ 0.77
DDR1-256	ENST00000505066	GPRC5A	Q8NFJ5	357 aa		19.88	■□□□□ 0.77
DDR1-256	ENST00000505066	KIF1BP	Q96EK5	621 aa		19.88	■□□□□ 0.77
DDR1-256	ENST00000505066	GLRX3	O76003	335 aa	Known RBP	19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	GDF11	O95390	407 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	SGPL1	O95470	568 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	POLR3D	P05423	398 aa	Predicted RBP	19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	RLBP1	P12271	317 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	USP14	P54578	494 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	USP17L2	Q6R6M4	530 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	AMOTL1	Q8IY63	956 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	PANK1	Q8TE04	598 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	CRNKL1	Q9BZJ0	848 aa	Known RBP	19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	UNC93B1	Q9H1C4	597 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	SERPINB13	Q9UIV8	391 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	ZBTB21	Q9ULJ3	1066 aa		19.87	■□□□□ 0.77
DDR1-256	ENST00000505066	APBB1	O00213	710 aa		19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	HMGCR	P04035	888 aa		19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	DYNLL1	P63167	89 aa	Known RBP	19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	TRMT44	Q8IYL2	757 aa	Known RBP	19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	DDRGK1	Q96HY6	314 aa		19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	DEFB118	Q96PH6	123 aa		19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	TLR7	Q9NYK1	1049 aa	Known RBP	19.86	■□□□□ 0.77
DDR1-256	ENST00000505066	MAGEB6P1	A0A0J9YX57	407 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066		H0YGN5	161 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	RAB11FIP3	O75154	756 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	MAPK4	P31152	587 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	HOXA7	P31268	230 aa	Predicted RBP	19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	CCNA1	P78396	465 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	RAB3GAP1	Q15042	981 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	CERKL	Q49MI3	558 aa	Predicted RBP	19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	ADGRA1	Q86SQ6	560 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	RHPN1	Q8TCX5	695 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	SOCS4	Q8WXH5	440 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	NUDT12	Q9BQG2	462 aa		19.85	■□□□□ 0.77
DDR1-256	ENST00000505066	EVI5	O60447	810 aa		19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	SLC9C2	Q5TAH2	1124 aa		19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	METTL16	Q86W50	562 aa	Known RBP	19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.84	■□□□□ 0.77	1e-8	■■■■■ 50
DDR1-256	ENST00000505066	EHD4	Q9H223	541 aa		19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	HMX1	Q9NP08	348 aa	Predicted RBP	19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	IL1RAPL2	Q9NP60	686 aa		19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	MORF4L1	Q9UBU8	362 aa		19.84	■□□□□ 0.77
DDR1-256	ENST00000505066	GH2	P01242	217 aa		19.83	■□□□□ 0.77
DDR1-256	ENST00000505066	HERVK_113	P62684	666 aa		19.83	■□□□□ 0.77
DDR1-256	ENST00000505066	ABCB5	Q2M3G0	1257 aa		19.83	■□□□□ 0.77
DDR1-256	ENST00000505066	DNAJC2	Q99543	621 aa	Known RBP	19.83	■□□□□ 0.77
DDR1-256	ENST00000505066	PAGR1	Q9BTK6	254 aa		19.83	■□□□□ 0.77
DDR1-256	ENST00000505066	TNRC18	O15417	2968 aa	Predicted RBP	19.83	■□□□□ 0.76
DDR1-256	ENST00000505066	DOCK1	Q14185	1865 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L15	C9J2P7	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L13	C9JLJ4	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L11	C9JVI0	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L18	D6R9N7	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L22	D6RA61	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L17	D6RBQ6	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L19	D6RCP7	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L20	D6RJB6	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	USP17L24	Q0WX57	530 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	NECAB2	Q7Z6G3	386 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	SHISA4	Q96DD7	197 aa		19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	P2RX7	Q99572	595 aa	Known RBP	19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	19.82	■□□□□ 0.76	9e-6	■■■■■ 32.4
DDR1-256	ENST00000505066	COLQ	Q9Y215	455 aa	Predicted RBP	19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	RBBP6	Q7Z6E9	1792 aa	Known RBP	19.82	■□□□□ 0.76
DDR1-256	ENST00000505066	MPHOSPH10	O00566	681 aa	Known RBP	19.81	■□□□□ 0.76
DDR1-256	ENST00000505066	RRP1B	Q14684	758 aa	Known RBP	19.81	■□□□□ 0.76
DDR1-256	ENST00000505066	ZYX	Q15942	572 aa	Known RBP	19.81	■□□□□ 0.76
DDR1-256	ENST00000505066	WDR78	Q5VTH9	848 aa		19.81	■□□□□ 0.76
DDR1-256	ENST00000505066	MCM9	Q9NXL9	1143 aa		19.81	■□□□□ 0.76
DDR1-256	ENST00000505066	RPTOR	Q8N122	1335 aa		19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	GOLIM4	O00461	696 aa		19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	ZKSCAN1	P17029	563 aa	Predicted RBP	19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	RGS2	P41220	211 aa		19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	ANKLE1	Q8NAG6	615 aa		19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	COG6	Q9Y2V7	657 aa		19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	IVNS1ABP	Q9Y6Y0	642 aa		19.8	■□□□□ 0.76
DDR1-256	ENST00000505066	CYP2B6	P20813	491 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	ERVK-9	P63128	1117 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	ERVK-24	P63145	666 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	ZSCAN25	Q6NSZ9	544 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	TATDN1	Q6P1N9	297 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	CHRDL2	Q6WN34	429 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	ANTXR1	Q9H6X2	564 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	DNAJC18	Q9H819	358 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	PAK6	Q9NQU5	681 aa	Predicted RBP	19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	NDUFB9	Q9Y6M9	179 aa		19.79	■□□□□ 0.76
DDR1-256	ENST00000505066	XRCC5	P13010	732 aa	Known RBP	19.78	■□□□□ 0.76
DDR1-256	ENST00000505066	PDE6A	P16499	860 aa		19.78	■□□□□ 0.76
DDR1-256	ENST00000505066	PLEKHH3	Q7Z736	793 aa		19.78	■□□□□ 0.76
DDR1-256	ENST00000505066	SH2D4A	Q9H788	454 aa		19.78	■□□□□ 0.76
DDR1-256	ENST00000505066	RCAN3	Q9UKA8	241 aa		19.78	■□□□□ 0.76
DDR1-256	ENST00000505066	RABGAP1	Q9Y3P9	1069 aa		19.78	■□□□□ 0.76
DDR1-256	ENST00000505066	GPATCH3	Q96I76	525 aa		19.77	■□□□□ 0.76
DDR1-256	ENST00000505066	NBPF3	Q9H094	633 aa		19.77	■□□□□ 0.76
DDR1-256	ENST00000505066	KIAA1683	Q9H0B3	1180 aa		19.77	■□□□□ 0.76
DDR1-256	ENST00000505066	EMILIN3	Q9NT22	766 aa		19.77	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms