RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 ERC1Q8IUD2 1116 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 MRPL9Q9BYD2 267 aaKnown RBP8.36□□□□□ -1.07
CDH9-202ENST00000505020 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.36□□□□□ -1.07
CDH9-202ENST00000505020 HSD17B7P56937 341 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
CDH9-202ENST00000505020 PTK2Q05397 1052 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 TRIM14Q14142 442 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 GRM3Q14832 879 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 C1orf53Q5VUE5 145 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 DESI1Q6ICB0 168 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 CATSPER4Q7RTX7 472 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 TAB3Q8N5C8 712 aaPredicted RBP8.36□□□□□ -1.07
CDH9-202ENST00000505020 NGEFQ8N5V2 710 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 LSMEM1Q8N8F7 131 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 TATDN2Q93075 761 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 ZDHHC16Q969W1 377 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 SHDQ96IW2 340 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 TNIP3Q96KP6 325 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 TRIM8Q9BZR9 551 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 PLEKHA5Q9HAU0 1116 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 ANKEF1Q9NU02 776 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 STAP2Q9UGK3 403 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 PA2G4Q9UQ80 394 aaKnown RBP8.36□□□□□ -1.07
CDH9-202ENST00000505020 SLC4A7Q9Y6M7 1214 aa8.36□□□□□ -1.07
CDH9-202ENST00000505020 GPRASP1Q5JY77 1395 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 TSPY2A6NKD2 308 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 USP17L7P0C7H9 530 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 TSPY3P0CV98 308 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 TSPY8P0CW00 308 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 HPDP32754 393 aaPredicted RBP8.35□□□□□ -1.07
CDH9-202ENST00000505020 GALNSP34059 522 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 UBXN2AP68543 259 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 TSPY1Q01534 308 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 PABPC4Q13310 644 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH9-202ENST00000505020 GALEQ14376 348 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 CBX2Q14781 532 aaPredicted RBP8.35□□□□□ -1.07
CDH9-202ENST00000505020 PLCB4Q15147 1175 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 KIAA0319Q5VV43 1072 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 FAM186BQ8IYM0 893 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 RMI1Q9H9A7 625 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 ARHGAP28Q9P2N2 729 aa8.35□□□□□ -1.07
CDH9-202ENST00000505020 hCG_1642624A0A1W2PR95 340 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 FOXN3O00409 490 aaPredicted RBP8.34□□□□□ -1.07
CDH9-202ENST00000505020 TIPRLO75663 272 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 COL9A1P20849 921 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 HOXD12P35452 270 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 EIF4A3P38919 411 aaKnown RBP8.34□□□□□ -1.07
CDH9-202ENST00000505020 MINDY4Q4G0A6 757 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 CYP26C1Q6V0L0 522 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 SH3RF1Q7Z6J0 888 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
CDH9-202ENST00000505020 ZBTB10Q96DT7 871 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 LUC7LQ9NQ29 371 aaKnown RBP8.34□□□□□ -1.07
CDH9-202ENST00000505020 SCUBE2Q9NQ36 999 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 TBC1D22BQ9NU19 505 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 MAPRE3Q9UPY8 281 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 ITIH6Q6UXX5 1313 aa8.34□□□□□ -1.07
CDH9-202ENST00000505020 A0A1B0GVC2 190 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 FAM155AB1AL88 458 aaPredicted RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 BOLA2-SMG1P6H3BVE0 249 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 GABRDO14764 452 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 G3BP1Q13283 466 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDH9-202ENST00000505020 GBX1Q14549 363 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 SLC9A5Q14940 896 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 C8orf34Q49A92 452 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 VPS53Q5VIR6 699 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 ADAM32Q8TC27 787 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 GIMAP1Q8WWP7 306 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 KIFC2Q96AC6 838 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 HOXC10Q9NYD6 342 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 RRN3Q9NYV6 651 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDH9-202ENST00000505020 TRHDEQ9UKU6 1024 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 TNKSO95271 1327 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 CD4P01730 458 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 MTHFD1P11586 935 aaKnown RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 IL4RP24394 825 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 IRS1P35568 1242 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 TTC31Q49AM3 519 aaPredicted RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 ARMC4Q5T2S8 1044 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 ISM2Q6H9L7 571 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 OR8H1Q8NGG4 311 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 BAP1Q92560 729 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 TARS2Q9BW92 718 aaKnown RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 VPS33BQ9H267 617 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 ATP8A2Q9NTI2 1148 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 ZNF358Q9NW07 568 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 FAM8A1Q9UBU6 413 aa8.33□□□□□ -1.08
CDH9-202ENST00000505020 DDX20Q9UHI6 824 aaKnown RBP8.33□□□□□ -1.08
CDH9-202ENST00000505020 GTF3C4Q9UKN8 822 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms