RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 TLR6Q9Y2C9 796 aa8.56□□□□□ -1.04
DEPDC1B-203ENST00000505017 ZNF865P0CJ78 1059 aaPredicted RBP8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 ETF1P62495 437 aaKnown RBP8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 C22orf34Q6ZV56 151 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 FBXO33Q7Z6M2 555 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 HID1Q8IV36 788 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 ASB11Q8WXH4 323 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 HSPA12BQ96MM6 686 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 TJP2Q9UDY2 1190 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 SHROOM4Q9ULL8 1493 aa8.55□□□□□ -1.04
DEPDC1B-203ENST00000505017 BTBD11A6QL63 1104 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 CST3P01034 146 aaPredicted RBP8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 CLCN7P51798 805 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 DAB2P98082 770 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 ZP2Q05996 745 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 IKZF1Q13422 519 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 LETMD1Q6P1Q0 360 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 FAM168AQ92567 244 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 ATP13A1Q9HD20 1204 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 CAPN6Q9Y6Q1 641 aa8.54□□□□□ -1.04
DEPDC1B-203ENST00000505017 GNAT3A8MTJ3 354 aa8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 FGD1P98174 961 aa8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 ZNF648Q5T619 568 aaPredicted RBP8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 MFSD2AQ8NA29 543 aa8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 FLAD1Q8NFF5 587 aa8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 XAGE3Q8WTP9 111 aa8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 DPH2Q9BQC3 489 aaPredicted RBP8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.53□□□□□ -1.04
DEPDC1B-203ENST00000505017 BIN1O00499 593 aa8.52□□□□□ -1.05
DEPDC1B-203ENST00000505017 FYB2Q5VWT5 728 aa8.52□□□□□ -1.05
DEPDC1B-203ENST00000505017 PHC3Q8NDX5 983 aa8.52□□□□□ -1.05
DEPDC1B-203ENST00000505017 CTNND2Q9UQB3 1225 aa8.52□□□□□ -1.05
DEPDC1B-203ENST00000505017 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 F6X3S4 739 aa8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 JAG1P78504 1218 aa8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 SFRP5Q5T4F7 317 aa8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 MRPL41Q8IXM3 137 aaKnown RBP8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 TPX2Q9ULW0 747 aaKnown RBP8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
DEPDC1B-203ENST00000505017 ZNF503-AS2A6NEH8 195 aa8.5□□□□□ -1.05
DEPDC1B-203ENST00000505017 CDH24Q86UP0 819 aa8.5□□□□□ -1.05
DEPDC1B-203ENST00000505017 ACSF2Q96CM8 615 aaPredicted RBP8.5□□□□□ -1.05
DEPDC1B-203ENST00000505017 CARS2Q9HA77 564 aaKnown RBP8.5□□□□□ -1.05
DEPDC1B-203ENST00000505017 CORINQ9Y5Q5 1042 aa8.5□□□□□ -1.05
DEPDC1B-203ENST00000505017 TACC3Q9Y6A5 838 aa8.5□□□□□ -1.05
DEPDC1B-203ENST00000505017 USP31Q70CQ4 1352 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 H3BS24 57 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 TAF1CQ15572 869 aaPredicted RBP8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 TMC4Q7Z404 712 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 DNAJB8Q8NHS0 232 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 MIR1-1HGQ9H1L0 117 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 LMCD1Q9NZU5 365 aa8.49□□□□□ -1.05
DEPDC1B-203ENST00000505017 FAM221AA4D161 298 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 WASH4PA8MWX3 477 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 CBX7O95931 251 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 ST13P50502 369 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 TNK2Q07912 1038 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 PSMD2Q13200 908 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 FZD5Q13467 585 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 TSNAXIP1Q2TAA8 658 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 BNC2Q6ZN30 1099 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 PPP1R13LQ8WUF5 828 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 TMEM40Q8WWA1 233 aa8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
DEPDC1B-203ENST00000505017 FAM155AB1AL88 458 aaPredicted RBP8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 PGRP06401 933 aa8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 RPL6Q02878 288 aaKnown RBP8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 MESP2Q0VG99 397 aa8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 ZNF124Q15973 351 aa8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 MCATQ8IVS2 390 aaKnown RBP8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 Q96M66 194 aa8.47□□□□□ -1.05
DEPDC1B-203ENST00000505017 UPK3BL1B0FP48 263 aa8.46□□□□□ -1.06
DEPDC1B-203ENST00000505017 UPK3BL2E5RIL1 263 aa8.46□□□□□ -1.06
DEPDC1B-203ENST00000505017 CILPO75339 1184 aa8.45□□□□□ -1.06
DEPDC1B-203ENST00000505017 SLC6A19Q695T7 634 aa8.45□□□□□ -1.06
DEPDC1B-203ENST00000505017 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
DEPDC1B-203ENST00000505017 UBE2FQ969M7 185 aa8.45□□□□□ -1.06
DEPDC1B-203ENST00000505017 RHOVQ96L33 236 aa8.45□□□□□ -1.06
DEPDC1B-203ENST00000505017 F13A1P00488 732 aa8.44□□□□□ -1.06
DEPDC1B-203ENST00000505017 LIN37Q96GY3 246 aaPredicted RBP8.44□□□□□ -1.06
DEPDC1B-203ENST00000505017 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
DEPDC1B-203ENST00000505017 PF4P02776 101 aa8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 ESR1P03372 595 aa8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 PDIA4P13667 645 aaKnown RBP8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 LMNB1P20700 586 aa8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 CAMK2GQ13555 558 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 THAP5Q7Z6K1 395 aa8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
DEPDC1B-203ENST00000505017 LMNB2Q03252 620 aa8.42□□□□□ -1.06
DEPDC1B-203ENST00000505017 CCDC84Q86UT8 332 aaPredicted RBP8.42□□□□□ -1.06
DEPDC1B-203ENST00000505017 CRELD1Q96HD1 420 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms