RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 INTS5Q6P9B9 1019 aaKnown RBP5.06□□□□□ -1.6
RFC1-209ENST00000504974 ZNF574Q6ZN55 896 aaPredicted RBP5.06□□□□□ -1.6
RFC1-209ENST00000504974 GK5Q6ZS86 529 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 REC114Q7Z4M0 266 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 C8orf37Q96NL8 207 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 BRMS1Q9HCU9 246 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 SSU72Q9NP77 194 aaKnown RBP5.06□□□□□ -1.6
RFC1-209ENST00000504974 KCNQ5Q9NR82 932 aa5.06□□□□□ -1.6
RFC1-209ENST00000504974 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.05□□□□□ -1.6
RFC1-209ENST00000504974 FAM87AP0C7U9 286 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 TAL1P17542 331 aaPredicted RBP5.05□□□□□ -1.6
RFC1-209ENST00000504974 CD96P40200 585 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 GJA8P48165 433 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 ARID5AQ03989 594 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 BNIP3Q12983 259 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 MAP7Q14244 749 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 MCTP1Q6DN14 999 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 CCDC81Q6ZN84 652 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 CPLX3Q8WVH0 158 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 ISL2Q96A47 359 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 FERD3LQ96RJ6 166 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.05□□□□□ -1.6
RFC1-209ENST00000504974 YIPF2Q9BWQ6 316 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 TANGO6Q9C0B7 1094 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 ATXN3LQ9H3M9 355 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 GINM1Q9NU53 330 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 CACNA2D2Q9NY47 1150 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 USP35Q9P2H5 1018 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 CCDC39Q9UFE4 941 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 PPT2Q9UMR5 302 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 PCDHB14Q9Y5E9 798 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 CORINQ9Y5Q5 1042 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 SNCAIPQ9Y6H5 919 aa5.05□□□□□ -1.6
RFC1-209ENST00000504974 ROBO2Q9HCK4 1378 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 SSBP05455 408 aaKnown RBP eCLIP5.04□□□□□ -1.6
RFC1-209ENST00000504974 PGRP06401 933 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 GRK4P32298 578 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 ZNF165P49910 485 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 OGFOD3Q6PK18 319 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 CDC37L1Q7L3B6 337 aa5.04□□□□□ -1.6
RFC1-209ENST00000504974 SMYD4Q8IYR2 804 aaPredicted RBP5.04□□□□□ -1.6
RFC1-209ENST00000504974 POLR3KQ9Y2Y1 108 aaPredicted RBP5.04□□□□□ -1.6
RFC1-209ENST00000504974 GFRA2O00451 464 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 ATF4P18848 351 aaPredicted RBP5.03□□□□□ -1.6
RFC1-209ENST00000504974 PLCG1P19174 1290 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 IRAK1P51617 712 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 ERVK-24P63145 666 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 CLCQ05315 142 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 PDE4BQ07343 736 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 DUSP27Q5VZP5 1158 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 SPRED2Q7Z698 418 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 SLITRK4Q8IW52 837 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 PLD6Q8N2A8 252 aaKnown RBP5.03□□□□□ -1.6
RFC1-209ENST00000504974 GIMAP7Q8NHV1 300 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 RASGRP4Q8TDF6 673 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 SPATA32Q96LK8 384 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 LRRC3Q9BY71 257 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 KLHL3Q9UH77 587 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 MRVI1Q9Y6F6 885 aa5.03□□□□□ -1.6
RFC1-209ENST00000504974 HTR3BO95264 441 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 SF3A1Q15459 793 aaKnown RBP5.02□□□□□ -1.61
RFC1-209ENST00000504974 ZBTB37Q5TC79 503 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 CYFIP1Q7L576 1253 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 TP53INP2Q8IXH6 220 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 TOP6BLQ8N6T0 577 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 SLC43A3Q8NBI5 491 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 RNF214Q8ND24 703 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 SREK1Q8WXA9 508 aaKnown RBP5.02□□□□□ -1.61
RFC1-209ENST00000504974 ANAPC16Q96DE5 110 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 CRBNQ96SW2 442 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 ADGRE2Q9UHX3 823 aa5.02□□□□□ -1.61
RFC1-209ENST00000504974 SYNGAP1Q96PV0 1343 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 FANCGO15287 622 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 ATP2B1P20020 1258 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 NTF4P34130 210 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 GTF2F1P35269 517 aaKnown RBP eCLIP5.01□□□□□ -1.61
RFC1-209ENST00000504974 COL9A2Q14055 689 aaPredicted RBP5.01□□□□□ -1.61
RFC1-209ENST00000504974 MLECQ14165 292 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 MCF2L2Q86YR7 1114 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 WFDC3Q8IUB2 231 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.01□□□□□ -1.61
RFC1-209ENST00000504974 FLCNQ8NFG4 579 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 ZNF507Q8TCN5 953 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 XAGE3Q8WTP9 111 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 SEC16BQ96JE7 1060 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 DPH2Q9BQC3 489 aaPredicted RBP5.01□□□□□ -1.61
RFC1-209ENST00000504974 METTL22Q9BUU2 404 aaPredicted RBP5.01□□□□□ -1.61
RFC1-209ENST00000504974 WNT10AQ9GZT5 417 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 REV1Q9UBZ9 1251 aa5.01□□□□□ -1.61
RFC1-209ENST00000504974 ANGEL1Q9UNK9 670 aaKnown RBP5.01□□□□□ -1.61
RFC1-209ENST00000504974 COL17A1Q9UMD9 1497 aaPredicted RBP5□□□□□ -1.61
RFC1-209ENST00000504974 CNTNAP4Q9C0A0 1308 aa5□□□□□ -1.61
RFC1-209ENST00000504974 ITIH2P19823 946 aa5□□□□□ -1.61
RFC1-209ENST00000504974 SOX9P48436 509 aa5□□□□□ -1.61
RFC1-209ENST00000504974 EIF6P56537 245 aaKnown RBP5□□□□□ -1.61
RFC1-209ENST00000504974 REXO1Q8N1G1 1221 aaKnown RBP5□□□□□ -1.61
RFC1-209ENST00000504974 FAM13CQ8NE31 585 aa5□□□□□ -1.61
RFC1-209ENST00000504974 DHX38Q92620 1227 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms