RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
COL4A5-207ENST00000504541 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
COL4A5-207ENST00000504541 SBNO1A3KN83 1393 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 LINC01387J3KSC0 135 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 CCNJLQ8IV13 435 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.01□□□□□ -1.13
COL4A5-207ENST00000504541 BCO2Q9BYV7 579 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 ADAM19Q9H013 955 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 BCL11AQ9H165 835 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 NUDCQ9Y266 331 aa8.01□□□□□ -1.13
COL4A5-207ENST00000504541 A0A096LPE4 126 aa8□□□□□ -1.13
COL4A5-207ENST00000504541 A0A1W2PPZ6 126 aa8□□□□□ -1.13
COL4A5-207ENST00000504541 METTL12A8MUP2 240 aa8□□□□□ -1.13
COL4A5-207ENST00000504541 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
COL4A5-207ENST00000504541 CENPBP07199 599 aaPredicted RBP8□□□□□ -1.13
COL4A5-207ENST00000504541 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
COL4A5-207ENST00000504541 SPRED3Q2MJR0 410 aa8□□□□□ -1.13
COL4A5-207ENST00000504541 NME9Q86XW9 330 aa8□□□□□ -1.13
COL4A5-207ENST00000504541 DUSP9Q99956 384 aaKnown RBP8□□□□□ -1.13
COL4A5-207ENST00000504541 FMN2Q9NZ56 1722 aa8□□□□□ -1.13
COL4A5-207ENST00000504541 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 GIPC1O14908 333 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 ARL4DP49703 201 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 GRM2Q14416 872 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 TXNDC11Q6PKC3 985 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 NXPE4Q6UWF7 544 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 DTHD1Q6ZMT9 781 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 BRINP3Q76B58 766 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 FRMD6Q96NE9 622 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 TCF12Q99081 682 aa7.99□□□□□ -1.13
COL4A5-207ENST00000504541 BHLHE41Q9C0J9 482 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-207ENST00000504541 TOPAZ1Q8N9V7 1692 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 OVOS2A0A0J9YW53 1432 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 OVOS2Q6IE36 1432 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 A0A0A0MRY4 1105 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 TMEM238LA0A1B0GVL6 79 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 DIAPH1O60610 1272 aaKnown RBP7.98□□□□□ -1.13
COL4A5-207ENST00000504541 TOM1O60784 492 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 GRIA4P48058 902 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 FCGRTP55899 365 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 WDR43Q15061 677 aaKnown RBP eCLIP7.98□□□□□ -1.13
COL4A5-207ENST00000504541 FAM9BQ8IZU0 186 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 GIPC2Q8TF65 315 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 SLC7A3Q8WY07 619 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 PARP2Q9UGN5 583 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 ITSN1Q15811 1721 aa7.98□□□□□ -1.13
COL4A5-207ENST00000504541 APBA3O96018 575 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 EPHA1P21709 976 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 PSMD2Q13200 908 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 CNGB1Q14028 1251 aaPredicted RBP7.97□□□□□ -1.13
COL4A5-207ENST00000504541 IKBKEQ14164 716 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 DTWD1Q8N5C7 304 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 ZFYVE1Q9HBF4 777 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 IQSEC2Q5JU85 1478 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 NALCNQ8IZF0 1738 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 ARHGEF10O15013 1369 aa7.97□□□□□ -1.13
COL4A5-207ENST00000504541 LTBP4Q8N2S1 1624 aa7.96□□□□□ -1.13
COL4A5-207ENST00000504541 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.13
COL4A5-207ENST00000504541 KRBA1A5PL33 1030 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 H3BRJ5 948 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 FSCN2O14926 492 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 GCP02774 474 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 GNA15P30679 374 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 TNNT2P45379 298 aaPredicted RBP7.96□□□□□ -1.14
COL4A5-207ENST00000504541 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.14
COL4A5-207ENST00000504541 ADAMTSL4Q6UY14 1074 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 MAP4K3Q8IVH8 894 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 LRRC59Q96AG4 307 aaKnown RBP7.96□□□□□ -1.14
COL4A5-207ENST00000504541 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 STRCP1A6NGW2 1772 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 AKAP12Q02952 1782 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 USP19O94966 1318 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 SPATA31A3Q5VYP0 1347 aa7.96□□□□□ -1.14
COL4A5-207ENST00000504541 MON2Q7Z3U7 1717 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 SPATA31C1P0DKV0 1188 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 EIF4BP23588 611 aaKnown RBP7.95□□□□□ -1.14
COL4A5-207ENST00000504541 IL13P35225 146 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 GRIK4Q16099 956 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 PRPF40BQ6NWY9 871 aaKnown RBP7.95□□□□□ -1.14
COL4A5-207ENST00000504541 FBXO33Q7Z6M2 555 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 FBXO11Q86XK2 927 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 FMR1NBQ8N0W7 255 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-207ENST00000504541 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
COL4A5-207ENST00000504541 IP6K1Q92551 441 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 OSBPL7Q9BZF2 842 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 SRCIN1Q9C0H9 1055 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 CLEC4MQ9H2X3 399 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-207ENST00000504541 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
COL4A5-207ENST00000504541 SEC31BQ9NQW1 1179 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 ZBED9Q6R2W3 1325 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
COL4A5-207ENST00000504541 SOX1O00570 391 aaPredicted RBP7.94□□□□□ -1.14
COL4A5-207ENST00000504541 XRCC5P13010 732 aaKnown RBP7.94□□□□□ -1.14
COL4A5-207ENST00000504541 COL8A1P27658 744 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms