RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CTCFP49711 727 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 RRP12Q5JTH9 1297 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 TATDN1Q6P1N9 297 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 SWAP70Q9UH65 585 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 SNCAIPQ9Y6H5 919 aa15.76■□□□□ 0.11
PDLIM7-212ENST00000504380 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 SLC27A2O14975 620 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 GH2P01242 217 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 RASA1P20936 1047 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 MKRN3Q13064 507 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 GRM1Q13255 1194 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 NECTIN1Q15223 517 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 CREB3L3Q68CJ9 461 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 TOMM22Q9NS69 142 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 CSADQ9Y600 493 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 LAMA4Q16363 1823 aa15.75■□□□□ 0.11
PDLIM7-212ENST00000504380 MYH8P13535 1937 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 NEDD4P46934 1319 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 REC8O95072 547 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 ZNF157P51786 506 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 PDE4BQ07343 736 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 ABCB5Q2M3G0 1257 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 STOX1Q6ZVD7 989 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 CLEC10AQ8IUN9 316 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 SCYL3Q8IZE3 742 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 USP26Q9BXU7 913 aa15.74■□□□□ 0.11
PDLIM7-212ENST00000504380 ATAD5Q96QE3 1844 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 GUCY1A2P33402 732 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 GJA5P36382 358 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 RGS19P49795 217 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 NOL9Q5SY16 702 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 RGMBQ6NW40 437 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 MFSD6Q6ZSS7 791 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 ZNF444Q8N0Y2 327 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 STAG1Q8WVM7 1258 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 WBP1LQ9NX94 342 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 ZBTB21Q9ULJ3 1066 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 DOCK1Q14185 1865 aa15.73■□□□□ 0.11
PDLIM7-212ENST00000504380 B4E1Z4 1266 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 RANBP6O60518 1105 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 PTPRAP18433 802 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 TFAP4Q01664 338 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 COL9A3Q14050 684 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 SEPT2Q15019 361 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 RAB3GAP1Q15042 981 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 DEFB115Q30KQ5 88 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 RASAL3Q86YV0 1011 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 PICK1Q9NRD5 415 aa15.72■□□□□ 0.11
PDLIM7-212ENST00000504380 E7EWF7 191 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 ORC4O43929 436 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 FGRP09769 529 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 ABHD8Q96I13 439 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 CABP5Q9NP86 173 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 ZHX2Q9Y6X8 837 aa15.71■□□□□ 0.11
PDLIM7-212ENST00000504380 SPDYE5A6NIY4 337 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 RASSF10A6NK89 507 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 NMT2O60551 498 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 HSPA4P34932 840 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 ERO1BQ86YB8 467 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 CCDC17Q96LX7 622 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 ZIC5Q96T25 663 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 RNF41Q9H4P4 317 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
PDLIM7-212ENST00000504380 TSPY2A6NKD2 308 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 USP17L5A8MUK1 530 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 AOC2O75106 756 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 KDM4AO75164 1064 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 ASNSP08243 561 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 SLC10A3P09131 477 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 TSPY3P0CV98 308 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 TSPY8P0CW00 308 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 VEGFBP49765 207 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 LBX1P52954 281 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 ATP2B2Q01814 1243 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 DGKZQ13574 1117 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 ADCK5Q3MIX3 580 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 SPRYD7Q5W111 196 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 CYB5R4Q7L1T6 521 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 CHST3Q7LGC8 479 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 ACER1Q8TDN7 264 aa15.69■□□□□ 0.1
PDLIM7-212ENST00000504380 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms