RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SND1Q7KZF4 910 aaKnown RBP eCLIP7.31□□□□□ -1.24
SUB1-204ENST00000504016 HID1Q8IV36 788 aa7.31□□□□□ -1.24
SUB1-204ENST00000504016 MFSD4AQ8N468 514 aa7.31□□□□□ -1.24
SUB1-204ENST00000504016 GAL3ST3Q96A11 431 aa7.31□□□□□ -1.24
SUB1-204ENST00000504016 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
SUB1-204ENST00000504016 CAP2P40123 477 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 CDK8P49336 464 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 FGD1P98174 961 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 CCDC85BQ15834 202 aaPredicted RBP7.3□□□□□ -1.24
SUB1-204ENST00000504016 MLANAQ16655 118 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 LETMD1Q6P1Q0 360 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 FAM84AQ96KN4 292 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 ATP13A1Q9HD20 1204 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 SEMA3GQ9NS98 782 aa7.3□□□□□ -1.24
SUB1-204ENST00000504016 CNTNAP4Q9C0A0 1308 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 H3BS24 57 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 ZNF865P0CJ78 1059 aaPredicted RBP7.29□□□□□ -1.24
SUB1-204ENST00000504016 GNA15P30679 374 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 ZNF746Q6NUN9 644 aaPredicted RBP7.29□□□□□ -1.24
SUB1-204ENST00000504016 C22orf34Q6ZV56 151 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 NPAS4Q8IUM7 802 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 RIN3Q8TB24 985 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 XAGE3Q8WTP9 111 aa7.29□□□□□ -1.24
SUB1-204ENST00000504016 ZNF503-AS2A6NEH8 195 aa7.28□□□□□ -1.24
SUB1-204ENST00000504016 CBX7O95931 251 aa7.28□□□□□ -1.24
SUB1-204ENST00000504016 GRK4P32298 578 aa7.28□□□□□ -1.24
SUB1-204ENST00000504016 RPS26P62854 115 aaKnown RBP7.28□□□□□ -1.24
SUB1-204ENST00000504016 FYB2Q5VWT5 728 aa7.28□□□□□ -1.24
SUB1-204ENST00000504016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.28□□□□□ -1.24
SUB1-204ENST00000504016 PRPF40AO75400 957 aaKnown RBP7.27□□□□□ -1.25
SUB1-204ENST00000504016 CST3P01034 146 aaPredicted RBP7.27□□□□□ -1.25
SUB1-204ENST00000504016 CYP7A1P22680 504 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 MESP2Q0VG99 397 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 SEPT6Q14141 434 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 PRAMEF13Q5VWM6 474 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 LIN37Q96GY3 246 aaPredicted RBP7.27□□□□□ -1.25
SUB1-204ENST00000504016 KIRREL1Q96J84 757 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 PCDHB5Q9Y5E4 795 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 CAPN6Q9Y6Q1 641 aa7.27□□□□□ -1.25
SUB1-204ENST00000504016 MAP3K11Q16584 847 aa7.26□□□□□ -1.25
SUB1-204ENST00000504016 TMEM67Q5HYA8 995 aa7.26□□□□□ -1.25
SUB1-204ENST00000504016 LCE1DQ5T752 114 aa7.26□□□□□ -1.25
SUB1-204ENST00000504016 MPZL3Q6UWV2 235 aa7.26□□□□□ -1.25
SUB1-204ENST00000504016 ST14Q9Y5Y6 855 aa7.26□□□□□ -1.25
SUB1-204ENST00000504016 AK5Q9Y6K8 562 aa7.26□□□□□ -1.25
SUB1-204ENST00000504016 GFRA2O00451 464 aa7.25□□□□□ -1.25
SUB1-204ENST00000504016 GLI1P08151 1106 aa7.25□□□□□ -1.25
SUB1-204ENST00000504016 THAP5Q7Z6K1 395 aa7.25□□□□□ -1.25
SUB1-204ENST00000504016 CDH24Q86UP0 819 aa7.25□□□□□ -1.25
SUB1-204ENST00000504016 UBE2FQ969M7 185 aa7.25□□□□□ -1.25
SUB1-204ENST00000504016 ZSWIM5Q9P217 1185 aa7.25□□□□□ -1.25
SUB1-204ENST00000504016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.24□□□□□ -1.25
SUB1-204ENST00000504016 PGRP06401 933 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 GDNFP39905 211 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 CCDC27Q2M243 656 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 AGMOQ6ZNB7 445 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 CCDC120Q96HB5 630 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 COX4I2Q96KJ9 171 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 DUSP9Q99956 384 aaKnown RBP7.24□□□□□ -1.25
SUB1-204ENST00000504016 MIR1-1HGQ9H1L0 117 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 TACC3Q9Y6A5 838 aa7.24□□□□□ -1.25
SUB1-204ENST00000504016 ANKRD33BA6NCL7 494 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 KIR3DL1P43629 444 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 LIG3P49916 1009 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 TNK2Q07912 1038 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 BHLHE22Q8NFJ8 381 aaPredicted RBP7.23□□□□□ -1.25
SUB1-204ENST00000504016 DPH2Q9BQC3 489 aaPredicted RBP7.23□□□□□ -1.25
SUB1-204ENST00000504016 RNF19AQ9NV58 838 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 TJP2Q9UDY2 1190 aa7.23□□□□□ -1.25
SUB1-204ENST00000504016 RAP1GAPP47736 663 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 PDE4BQ07343 736 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
SUB1-204ENST00000504016 SLC6A19Q695T7 634 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 PRR23BQ6ZRT6 265 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 MRPL41Q8IXM3 137 aaKnown RBP7.22□□□□□ -1.25
SUB1-204ENST00000504016 TMEM87BQ96K49 555 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 ALPK1Q96QP1 1244 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 SLAMF8Q9P0V8 285 aa7.22□□□□□ -1.25
SUB1-204ENST00000504016 RBAK-RBAKDNI3L0D1 243 aa7.21□□□□□ -1.26
SUB1-204ENST00000504016 ETV3P41162 512 aa7.21□□□□□ -1.26
SUB1-204ENST00000504016 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
SUB1-204ENST00000504016 TTC6Q86TZ1 520 aa7.21□□□□□ -1.26
SUB1-204ENST00000504016 JARID2Q92833 1246 aaPredicted RBP7.21□□□□□ -1.26
SUB1-204ENST00000504016 PPP1R16BQ96T49 567 aa7.21□□□□□ -1.26
SUB1-204ENST00000504016 RAC2P15153 192 aa7.2□□□□□ -1.26
SUB1-204ENST00000504016 MEI1Q5TIA1 1274 aa7.2□□□□□ -1.26
SUB1-204ENST00000504016 DIEXFQ68CQ4 756 aaKnown RBP7.2□□□□□ -1.26
SUB1-204ENST00000504016 SYDE1Q6ZW31 735 aaPredicted RBP7.2□□□□□ -1.26
SUB1-204ENST00000504016 PIWIL2Q8TC59 973 aaKnown RBP7.2□□□□□ -1.26
SUB1-204ENST00000504016 RLBP1P12271 317 aa7.19□□□□□ -1.26
SUB1-204ENST00000504016 TFE3P19532 575 aaPredicted RBP7.19□□□□□ -1.26
SUB1-204ENST00000504016 FBLN7Q53RD9 439 aa7.19□□□□□ -1.26
SUB1-204ENST00000504016 TMPRSS7Q7RTY8 843 aa7.19□□□□□ -1.26
SUB1-204ENST00000504016 MCATQ8IVS2 390 aaKnown RBP7.19□□□□□ -1.26
SUB1-204ENST00000504016 DIRC2Q96SL1 478 aa7.19□□□□□ -1.26
SUB1-204ENST00000504016 TLR6Q9Y2C9 796 aa7.19□□□□□ -1.26
SUB1-204ENST00000504016 TSPAN15O95858 294 aa7.18□□□□□ -1.26
SUB1-204ENST00000504016 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms