RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 SHMT1P34896 483 aa20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 CTCFP49711 727 aaPredicted RBP20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 CERKLQ49MI3 558 aaPredicted RBP20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 OTUD7BQ6GQQ9 843 aa20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 IFNL1Q8IU54 200 aa20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 DYNLL2Q96FJ2 89 aa20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 KCNH4Q9UQ05 1017 aa20.28■□□□□ 0.84
CXCL1P1-201ENST00000502804 LAMB1P07942 1786 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 MINDY4BA8MYZ0 360 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 CXCL11O14625 94 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 ALDH1A1P00352 501 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 MFAP1P55081 439 aaKnown RBP20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 CWC27Q6UX04 472 aaKnown RBP20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 CCDC84Q86UT8 332 aaPredicted RBP20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 BRI3BPQ8WY22 251 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 TBC1D2Q9BYX2 928 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 NAPBQ9H115 298 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 AS3MTQ9HBK9 375 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 ZBTB21Q9ULJ3 1066 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 AFG3L2Q9Y4W6 797 aa20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 BAZ2AQ9UIF9 1905 aaKnown RBP20.27■□□□□ 0.84
CXCL1P1-201ENST00000502804 IGF2BP3O00425 579 aaKnown RBP eCLIP20.26■□□□□ 0.83
CXCL1P1-201ENST00000502804 JAG1P78504 1218 aa20.26■□□□□ 0.83
CXCL1P1-201ENST00000502804 ABCB5Q2M3G0 1257 aa20.26■□□□□ 0.83
CXCL1P1-201ENST00000502804 PTPN18Q99952 460 aa20.26■□□□□ 0.83
CXCL1P1-201ENST00000502804 CABP5Q9NP86 173 aa20.26■□□□□ 0.83
CXCL1P1-201ENST00000502804 CCDC171Q6TFL3 1326 aa20.26■□□□□ 0.83
CXCL1P1-201ENST00000502804 SMIM22K7EJ46 135 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 GH2P01242 217 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 HSPA8P11142 646 aaKnown RBP20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 CDK8P49336 464 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 VPS53Q5VIR6 699 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 C16orf86Q6ZW13 317 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 ZNF589Q86UQ0 364 aaPredicted RBP20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 SKAP1Q86WV1 359 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 TSKSQ9UJT2 592 aa20.25■□□□□ 0.83
CXCL1P1-201ENST00000502804 TRIM75PA6NK02 468 aa20.24■□□□□ 0.83
CXCL1P1-201ENST00000502804 FOXP2O15409 715 aa20.24■□□□□ 0.83
CXCL1P1-201ENST00000502804 SPP2Q13103 211 aa20.24■□□□□ 0.83
CXCL1P1-201ENST00000502804 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
CXCL1P1-201ENST00000502804 ZNF280CQ8ND82 737 aa20.24■□□□□ 0.83
CXCL1P1-201ENST00000502804 ATAD5Q96QE3 1844 aa20.24■□□□□ 0.83
CXCL1P1-201ENST00000502804 A0A0G2JLL6 359 aaPredicted RBP20.23■□□□□ 0.83
CXCL1P1-201ENST00000502804 MPHOSPH10O00566 681 aaKnown RBP20.23■□□□□ 0.83
CXCL1P1-201ENST00000502804 LBX1P52954 281 aa20.23■□□□□ 0.83
CXCL1P1-201ENST00000502804 PRRT2Q7Z6L0 340 aaPredicted RBP20.23■□□□□ 0.83
CXCL1P1-201ENST00000502804 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
CXCL1P1-201ENST00000502804 ROBO3Q96MS0 1386 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 HSPD1P10809 573 aaKnown RBP20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 RAB3GAP1Q15042 981 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 ALX1Q15699 326 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 FASTKD5Q7L8L6 764 aaKnown RBP20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 STK11IPQ8N1F8 1099 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 CCDC17Q96LX7 622 aa20.22■□□□□ 0.83
CXCL1P1-201ENST00000502804 PHIPQ8WWQ0 1821 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 BTBD19C9JJ37 291 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 SLC3A2P08195 630 aaKnown RBP20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 CHMLP26374 656 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 PPARAQ07869 468 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 GADL1Q6ZQY3 521 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 ANKRD23Q86SG2 305 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 MKNK2Q9HBH9 465 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 ZNF287Q9HBT7 754 aa20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 ZCCHC17Q9NP64 241 aaKnown RBP20.21■□□□□ 0.83
CXCL1P1-201ENST00000502804 FGAP02671 866 aa20.2■□□□□ 0.82
CXCL1P1-201ENST00000502804 MOGSQ13724 837 aa20.2■□□□□ 0.82
CXCL1P1-201ENST00000502804 BMP2KLQ5H9B9 411 aa20.2■□□□□ 0.82
CXCL1P1-201ENST00000502804 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
CXCL1P1-201ENST00000502804 PCNTO95613 3336 aa20.2■□□□□ 0.82
CXCL1P1-201ENST00000502804 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 AKR1B1P15121 316 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 BACE1P56817 501 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 PDE4BQ07343 736 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 SEPT2Q15019 361 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 TAF1CQ15572 869 aaPredicted RBP20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 PRDM10Q9NQV6 1147 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 ZMYM6O95789 1325 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 RAD50Q92878 1312 aa20.19■□□□□ 0.82
CXCL1P1-201ENST00000502804 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 PDHXO00330 501 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 GUCY1A2P33402 732 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 HMGCS2P54868 508 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 CRHR2Q13324 411 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 MTMR2Q13614 643 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 SH3D19Q5HYK7 790 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 GPAT2Q6NUI2 795 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 ZFYVE28Q9HCC9 887 aa20.18■□□□□ 0.82
CXCL1P1-201ENST00000502804 RASA1P20936 1047 aa20.17■□□□□ 0.82
CXCL1P1-201ENST00000502804 ZNF444Q8N0Y2 327 aaPredicted RBP20.17■□□□□ 0.82
CXCL1P1-201ENST00000502804 FEZ1Q99689 392 aa20.17■□□□□ 0.82
CXCL1P1-201ENST00000502804 DSCC1Q9BVC3 393 aa20.17■□□□□ 0.82
CXCL1P1-201ENST00000502804 TMOD4Q9NZQ9 345 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms