RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 ZNF444Q8N0Y2 327 aaPredicted RBP23.1■■□□□ 1.29
LINC01550-201ENST00000499006 ESR2Q92731 530 aa23.1■■□□□ 1.29
LINC01550-201ENST00000499006 ZNF112Q9UJU3 913 aa23.1■■□□□ 1.29
LINC01550-201ENST00000499006 RANBP6O60518 1105 aaKnown RBP23.09■■□□□ 1.29
LINC01550-201ENST00000499006 KDM4AO75164 1064 aa23.09■■□□□ 1.29
LINC01550-201ENST00000499006 FMR1Q06787 632 aaKnown RBP eCLIP23.09■■□□□ 1.29
LINC01550-201ENST00000499006 CERKLQ49MI3 558 aaPredicted RBP23.09■■□□□ 1.29
LINC01550-201ENST00000499006 CYB5R4Q7L1T6 521 aa23.09■■□□□ 1.29
LINC01550-201ENST00000499006 CCDC17Q96LX7 622 aa23.09■■□□□ 1.29
LINC01550-201ENST00000499006 ZNF341Q9BYN7 854 aa23.09■■□□□ 1.29
LINC01550-201ENST00000499006 PLIN4Q96Q06 1357 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 PHIPQ8WWQ0 1821 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 USP2O75604 605 aaPredicted RBP23.08■■□□□ 1.29
LINC01550-201ENST00000499006 NF2P35240 595 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 ANTXR2P58335 489 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 EXOSC10Q01780 885 aaKnown RBP23.08■■□□□ 1.29
LINC01550-201ENST00000499006 FAM47AQ5JRC9 791 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 BLOC1S2Q6QNY1 142 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 RUFY3Q7L099 469 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 KLRG1Q96E93 195 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 FZD1Q9UP38 647 aa23.08■■□□□ 1.29
LINC01550-201ENST00000499006 CPA1P15085 419 aa23.07■■□□□ 1.28
LINC01550-201ENST00000499006 AKR1B1P15121 316 aa23.07■■□□□ 1.28
LINC01550-201ENST00000499006 TFAP4Q01664 338 aa23.07■■□□□ 1.28
LINC01550-201ENST00000499006 DHX32Q7L7V1 743 aaKnown RBP23.07■■□□□ 1.28
LINC01550-201ENST00000499006 UPF3BQ9BZI7 483 aaKnown RBP23.07■■□□□ 1.28
LINC01550-201ENST00000499006 WDR19Q8NEZ3 1342 aa23.07■■□□□ 1.28
LINC01550-201ENST00000499006 TSPY2A6NKD2 308 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 TOMM70O94826 608 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 RPS6KB1P23443 525 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 MCM5P33992 734 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 CAP2P40123 477 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 NEDD1Q8NHV4 660 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 RBM46Q8TBY0 533 aaKnown RBP23.06■■□□□ 1.28
LINC01550-201ENST00000499006 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.06■■□□□ 1.28
LINC01550-201ENST00000499006 CYP46A1Q9Y6A2 500 aa23.06■■□□□ 1.28
LINC01550-201ENST00000499006 PPP1R12BO60237 982 aaPredicted RBP23.05■■□□□ 1.28
LINC01550-201ENST00000499006 TSPY3P0CV98 308 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 TSPY8P0CW00 308 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 JAG1P78504 1218 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 RABEP1Q15276 862 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 MAP3K11Q16584 847 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 SHROOM1Q2M3G4 852 aaPredicted RBP23.05■■□□□ 1.28
LINC01550-201ENST00000499006 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.05■■□□□ 1.28
LINC01550-201ENST00000499006 TCP11L1Q9NUJ3 509 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 PASKQ96RG2 1323 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 IGKV6D-41A0A0C4DH26 115 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 CTNND1O60716 968 aaKnown RBP23.05■■□□□ 1.28
LINC01550-201ENST00000499006 GDF11O95390 407 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 ABCB5Q2M3G0 1257 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 CHST3Q7LGC8 479 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 WRNIP1Q96S55 665 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 MTA3Q9BTC8 594 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 IL17RBQ9NRM6 502 aa23.05■■□□□ 1.28
LINC01550-201ENST00000499006 PRC1O43663 620 aa23.04■■□□□ 1.28
LINC01550-201ENST00000499006 INPP5BP32019 993 aa23.04■■□□□ 1.28
LINC01550-201ENST00000499006 GUCY1A2P33402 732 aa23.04■■□□□ 1.28
LINC01550-201ENST00000499006 PRKG1Q13976 671 aa23.04■■□□□ 1.28
LINC01550-201ENST00000499006 TTC14Q96N46 770 aa23.04■■□□□ 1.28
LINC01550-201ENST00000499006 NMT2O60551 498 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 NOVP48745 357 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 NEK4P51957 841 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 TMEM179Q6ZVK1 233 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 IQCA1Q86XH1 822 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 FBXL16Q8N461 479 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 IGDCC4Q8TDY8 1250 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 TCEANC2Q96MN5 208 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 ZKSCAN3Q9BRR0 538 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 GINM1Q9NU53 330 aa23.03■■□□□ 1.28
LINC01550-201ENST00000499006 GH2P01242 217 aa23.02■■□□□ 1.28
LINC01550-201ENST00000499006 IREB2P48200 963 aaKnown RBP23.02■■□□□ 1.28
LINC01550-201ENST00000499006 NOL9Q5SY16 702 aaKnown RBP23.02■■□□□ 1.28
LINC01550-201ENST00000499006 CST9Q5W186 159 aa23.02■■□□□ 1.28
LINC01550-201ENST00000499006 IL27Q8NEV9 243 aa23.02■■□□□ 1.28
LINC01550-201ENST00000499006 TMEM87BQ96K49 555 aa23.02■■□□□ 1.28
LINC01550-201ENST00000499006 ZSCAN10Q96SZ4 725 aaPredicted RBP23.02■■□□□ 1.28
LINC01550-201ENST00000499006 AGXT2Q9BYV1 514 aa23.02■■□□□ 1.28
LINC01550-201ENST00000499006 ALDH8A1Q9H2A2 487 aaPredicted RBP23.02■■□□□ 1.28
LINC01550-201ENST00000499006 ZBTB21Q9ULJ3 1066 aa23.02■■□□□ 1.28
LINC01550-201ENST00000499006 ANGEL1Q9UNK9 670 aaKnown RBP23.02■■□□□ 1.28
LINC01550-201ENST00000499006 MPHOSPH10O00566 681 aaKnown RBP23.01■■□□□ 1.27
LINC01550-201ENST00000499006 CELF2O95319 508 aaKnown RBP23.01■■□□□ 1.27
LINC01550-201ENST00000499006 SEC23AQ15436 765 aa23.01■■□□□ 1.27
LINC01550-201ENST00000499006 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.01■■□□□ 1.27
LINC01550-201ENST00000499006 MOB2Q70IA6 237 aa23.01■■□□□ 1.27
LINC01550-201ENST00000499006 ZKSCAN4Q969J2 545 aaPredicted RBP23.01■■□□□ 1.27
LINC01550-201ENST00000499006 LRRC2Q9BYS8 371 aa23.01■■□□□ 1.27
LINC01550-201ENST00000499006 ZNF408Q9H9D4 720 aa23.01■■□□□ 1.27
LINC01550-201ENST00000499006 CABP5Q9NP86 173 aa23.01■■□□□ 1.27
LINC01550-201ENST00000499006 PTPRFP10586 1907 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 ASNSP08243 561 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 FKBP1BP68106 108 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 MAP3K9P80192 1104 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 SEPT2Q15019 361 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 RCSD1Q6JBY9 416 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 ARMC9Q7Z3E5 817 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 SCYL3Q8IZE3 742 aa23■■□□□ 1.27
LINC01550-201ENST00000499006 ENAHQ8N8S7 591 aaPredicted RBP23■■□□□ 1.27
LINC01550-201ENST00000499006 CEP95Q96GE4 821 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms