RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 TRIM15Q9C019 465 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 POGZQ7Z3K3 1410 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 GSNP06396 782 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 ZCRB1Q8TBF4 217 aaKnown RBP12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 CDKL2Q92772 493 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 SERPINB10P48595 397 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 STX1BP61266 288 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 SLC9C1Q4G0N8 1177 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 ZBTB43O43298 467 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 KRT10P13645 584 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 GJB2P29033 226 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 HOXA7P31268 230 aaPredicted RBP12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 KRT71Q3SY84 523 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 H0YC42 278 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 GOLGA8RI6L899 631 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 SSFA2P28290 1259 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 C16orf87Q6PH81 154 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 SRRM1Q8IYB3 904 aaKnown RBP12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 PPP1R12AO14974 1030 aaPredicted RBP12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 AFMP43652 599 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 BIRC3Q13489 604 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 CNNM4Q6P4Q7 775 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 BBOF1Q8ND07 529 aa12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
AC055713.1-201ENST00000498967 HMGXB3Q12766 1538 aa12.33□□□□□ -0.43
AC055713.1-201ENST00000498967 TTI1O43156 1089 aa12.33□□□□□ -0.43
AC055713.1-201ENST00000498967 WBP4O75554 376 aaKnown RBP12.33□□□□□ -0.43
AC055713.1-201ENST00000498967 SUN1O94901 812 aa12.33□□□□□ -0.43
AC055713.1-201ENST00000498967 MRPL28Q13084 256 aaKnown RBP12.33□□□□□ -0.43
AC055713.1-201ENST00000498967 ANAPC5Q9UJX4 755 aa12.33□□□□□ -0.43
AC055713.1-201ENST00000498967 C4BPBP20851 252 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 KRT2P35908 639 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 IFIH1Q9BYX4 1025 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 SH2D4AQ9H788 454 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 ABCC11Q96J66 1382 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 EIF3CLB5ME19 914 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 EXOC5O00471 708 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 GPC4O75487 556 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 PLCG2P16885 1265 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 ENAHQ8N8S7 591 aaPredicted RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 RSAD2Q8WXG1 361 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 EIF3CQ99613 913 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 IPO5O00410 1097 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 ZNF263O14978 683 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 RANBP1P43487 201 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 HDAC4P56524 1084 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 RTN1Q16799 776 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 KIF2CQ99661 725 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 CCT2P78371 535 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 ABTB1Q969K4 478 aaPredicted RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 CABP1Q9NZU7 370 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 MYO18AQ92614 2054 aaKnown RBP12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 BCAR3O75815 825 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 KRT82Q9NSB4 513 aa12.33□□□□□ -0.44
AC055713.1-201ENST00000498967 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 HDAC11Q96DB2 347 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 JRKLQ9Y4A0 524 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 NFKBIAP25963 317 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 HDDC2Q7Z4H3 204 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 RUNDC3BQ96NL0 473 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 TRAIPQ9BWF2 469 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 ANKRD12Q6UB98 2062 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 OATP04181 439 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 CWF19L2Q2TBE0 894 aaKnown RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 TYW5A2RUC4 315 aaKnown RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 CALUO43852 315 aaPredicted RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 TMTC3Q6ZXV5 915 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 TSC1Q92574 1164 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 VAT1LQ9HCJ6 419 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 TMEM232C9JQI7 657 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SNX1Q13596 522 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 IQCB1Q15051 598 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 GIPC2Q8TF65 315 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 AK9Q5TCS8 1911 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 RTL9Q8NET4 1388 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 ARHGAP44Q17R89 818 aa12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
AC055713.1-201ENST00000498967 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms