RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 RAD17O75943 681 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 CTDNEP1O95476 244 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 NCLP19338 710 aaKnown RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 GNAQP50148 359 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 PLCD1P51178 756 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 AKAP17AQ02040 695 aaKnown RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 PICALMQ13492 652 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 DLGAP5Q15398 846 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 CFAP100Q494V2 611 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 MCTP1Q6DN14 999 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 FOXP4Q8IVH2 680 aaPredicted RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 STK11IPQ8N1F8 1099 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 CTCFLQ8NI51 663 aaPredicted RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 DDX11Q96FC9 970 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 GMLQ99445 158 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 ZKSCAN3Q9BRR0 538 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 TRIM34Q9BYJ4 488 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 NCOA5Q9HCD5 579 aaKnown RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 PI4KBQ9UBF8 816 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 SAP30BPQ9UHR5 308 aaKnown RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 SERPINB13Q9UIV8 391 aa9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 COL2A1P02458 1487 aaPredicted RBP9.84□□□□□ -0.83
SPIRE1-211ENST00000498803 NFKBIEO00221 500 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 XBP1P17861 261 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 RASA1P20936 1047 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 ADD1P35611 737 aaKnown RBP9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 GABPAQ06546 454 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 TRIM29Q14134 588 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 NUP133Q8WUM0 1156 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 DYNLL2Q96FJ2 89 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 C8orf76Q96K31 380 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 LZTS2Q9BRK4 669 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 RNF26Q9BY78 433 aaPredicted RBP9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 LAMB1P07942 1786 aa9.83□□□□□ -0.84
SPIRE1-211ENST00000498803 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 TRAK2O60296 914 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 DEXIO95424 95 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 FMNL1O95466 1100 aaPredicted RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 MBD3O95983 291 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 KRT85P78386 507 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 CXCL9Q07325 125 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 TROAPQ12815 778 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 NTRK3Q16288 839 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 FAM47AQ5JRC9 791 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 CRACR2BQ8N4Y2 399 aaPredicted RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 TMEM87AQ8NBN3 555 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 FBXO18Q8NFZ0 1043 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 FOXD4L4Q8WXT5 416 aaPredicted RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 DPF2Q92785 391 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 ZNF396Q96N95 335 aaPredicted RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 SCAND2PQ9GZW5 306 aaPredicted RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 DDX4Q9NQI0 724 aaKnown RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 CFAP45Q9UL16 551 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 PLIN4Q96Q06 1357 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 NAV1Q8NEY1 1877 aa9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
SPIRE1-211ENST00000498803 ATRNL1Q5VV63 1379 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 TOP1P11387 765 aaKnown RBP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 CDC27P30260 824 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 TNNI2P48788 182 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 CDC37L1Q7L3B6 337 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 BRAPQ7Z569 592 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 FAM83AQ86UY5 434 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 ZSCAN29Q8IWY8 852 aaPredicted RBP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 FAM177A1Q8N128 213 aaPredicted RBP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 PNMA1Q8ND90 353 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 NKX2-3Q8TAU0 364 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 ALG1Q9BT22 464 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 SENP2Q9HC62 589 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 FAM217BQ9NTX9 383 aaPredicted RBP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 HERC5Q9UII4 1024 aaKnown RBP9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 STX8Q9UNK0 236 aa9.81□□□□□ -0.84
SPIRE1-211ENST00000498803 SMIM22K7EJ46 135 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 FZD9O00144 591 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 PRPF3O43395 683 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 PRPF40AO75400 957 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 LMNB1P20700 586 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 SMARCA1P28370 1054 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 NOVP48745 357 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 ZNF280AP59817 542 aaPredicted RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 NFIAQ12857 509 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 TNFAIP1Q13829 316 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 KLHL40Q2TBA0 621 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 SPDYE2Q495Y8 402 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 RCSD1Q6JBY9 416 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 TMTC3Q6ZXV5 915 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 METTL16Q86W50 562 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 FAM151AQ8WW52 585 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 PRMT6Q96LA8 375 aaPredicted RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 SLC26A6Q9BXS9 759 aa9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 TDRD3Q9H7E2 651 aaKnown RBP9.8□□□□□ -0.84
SPIRE1-211ENST00000498803 IL17RBQ9NRM6 502 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms