RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
COL6A1-206ENST00000498614 TDO2P48775 406 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 MYL5Q02045 173 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 AKNAD1Q5T1N1 836 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 SHC4Q6S5L8 630 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 TIGD1Q96MW7 591 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 CARD6Q9BX69 1037 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 RTCBQ9Y3I0 505 aaKnown RBP18.79■□□□□ 0.6
COL6A1-206ENST00000498614 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 FAM193AP78312 1265 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 EN1Q05925 392 aaPredicted RBP18.78■□□□□ 0.6
COL6A1-206ENST00000498614 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 VSTM4Q8IW00 320 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 HPSEQ9Y251 543 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 CBFA2T2O43439 604 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 CYP2C19P33261 490 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 LIFRP42702 1097 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 TRIM29Q14134 588 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 TMCO3Q6UWJ1 677 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 PARP3Q9Y6F1 533 aa18.78■□□□□ 0.6
COL6A1-206ENST00000498614 SEC31AO94979 1220 aaKnown RBP18.77■□□□□ 0.6
COL6A1-206ENST00000498614 NTSR2O95665 410 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 CHRNDQ07001 517 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 BICDL1Q6ZP65 573 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
COL6A1-206ENST00000498614 SSRP1Q08945 709 aaKnown RBP18.77■□□□□ 0.6
COL6A1-206ENST00000498614 PTPAQ15257 358 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 PARP10Q53GL7 1025 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 CREBRFQ8IUR6 639 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 CNNM2Q9H8M5 875 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 FANCLQ9NW38 375 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 ARGLU1Q9NWB6 273 aaPredicted RBP18.77■□□□□ 0.6
COL6A1-206ENST00000498614 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
COL6A1-206ENST00000498614 COL4A1P02462 1669 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 VWA3AA6NCI4 1184 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 TOP1P11387 765 aaKnown RBP18.76■□□□□ 0.59
COL6A1-206ENST00000498614 RC3H1Q5TC82 1133 aaKnown RBP18.76■□□□□ 0.59
COL6A1-206ENST00000498614 TMEM139Q8IV31 216 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 FAM177A1Q8N128 213 aaPredicted RBP18.76■□□□□ 0.59
COL6A1-206ENST00000498614 CLIC6Q96NY7 704 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 KRT23Q9C075 422 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 INTS13Q9NVM9 706 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 TIAM2Q8IVF5 1701 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 TAF1LQ8IZX4 1826 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 PLSCR1O15162 318 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 GUCY1A2P33402 732 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
COL6A1-206ENST00000498614 DEFB132Q7Z7B7 95 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 RGS22Q8NE09 1264 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 MAP3K14Q99558 947 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.76■□□□□ 0.59
COL6A1-206ENST00000498614 SRRTQ9BXP5 876 aaKnown RBP18.76■□□□□ 0.59
COL6A1-206ENST00000498614 NACAP1Q9BZK3 213 aa18.76■□□□□ 0.59
COL6A1-206ENST00000498614 SLC27A3Q5K4L6 730 aa18.75■□□□□ 0.59
COL6A1-206ENST00000498614 METTL16Q86W50 562 aaKnown RBP18.75■□□□□ 0.59
COL6A1-206ENST00000498614 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
COL6A1-206ENST00000498614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.75■□□□□ 0.59
COL6A1-206ENST00000498614 EFCAB8A8MWE9 144 aa18.75■□□□□ 0.59
COL6A1-206ENST00000498614 PPP6R2O75170 966 aa18.75■□□□□ 0.59
COL6A1-206ENST00000498614 FMNL1O95466 1100 aaPredicted RBP18.75■□□□□ 0.59
COL6A1-206ENST00000498614 FOXP4Q8IVH2 680 aaPredicted RBP18.75■□□□□ 0.59
COL6A1-206ENST00000498614 CMTR1Q8N1G2 835 aaKnown RBP18.75■□□□□ 0.59
COL6A1-206ENST00000498614 STAG1Q8WVM7 1258 aa18.75■□□□□ 0.59
COL6A1-206ENST00000498614 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.75■□□□□ 0.59
COL6A1-206ENST00000498614 PPP2R2CQ9Y2T4 447 aa18.75■□□□□ 0.59
COL6A1-206ENST00000498614 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 POLR3GO15318 223 aaPredicted RBP18.74■□□□□ 0.59
COL6A1-206ENST00000498614 PDE4BQ07343 736 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 WTAPQ15007 396 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 LONRF3Q496Y0 759 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 JMYQ8N9B5 988 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 TMEM51Q9NW97 253 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 BCORQ6W2J9 1755 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
COL6A1-206ENST00000498614 ZSCAN12O43309 604 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 GNAT2P19087 354 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 HSP90AA4PQ58FG1 418 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 RESP18Q5W5W9 173 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 OLFM4Q6UX06 510 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 ADGRA1Q86SQ6 560 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 SDR42E1Q8WUS8 393 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 CALCOCO1Q9P1Z2 691 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 KCNJ14Q9UNX9 436 aa18.74■□□□□ 0.59
COL6A1-206ENST00000498614 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 STK36Q9NRP7 1315 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 FAM237AA0A1B0GTK4 181 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 IFNAR1P17181 557 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 BMP6P22004 513 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 CYP7A1P22680 504 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 ZNF827Q17R98 1081 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 WDR24Q96S15 920 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 CICQ96RK0 1608 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms