RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 THSD7AQ9UPZ6 1657 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 MYO1BO43795 1136 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ORC4O43929 436 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 MBD3O95983 291 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 MYBP10242 640 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 BMP7P18075 431 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 KRT15P19012 456 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 FNBP1LQ5T0N5 605 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 TMEM214Q6NUQ4 689 aaKnown RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 RNF19BQ6ZMZ0 732 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 POLNQ7Z5Q5 900 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SYNPRQ8TBG9 265 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ADAMTS16Q8TE57 1224 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 CNDP1Q96KN2 507 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 KLHL32Q96NJ5 620 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 TRAF4Q9BUZ4 470 aaPredicted RBP1.74□□□□□ -2.13
XRN1-214ENST00000498077 L2HGDHQ9H9P8 463 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 EXOC1Q9NV70 894 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 VWA7Q9Y334 891 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 NRXN1Q9ULB1 1477 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 SLIT3O75094 1523 aa1.74□□□□□ -2.13
XRN1-214ENST00000498077 ANKRD62A6NC57 917 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 CAPN8A6NHC0 703 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 AP3B1O00203 1094 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PPFIA3O75145 1194 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 RASA1P20936 1047 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PIK3CGP48736 1102 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PLCD1P51178 756 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 MYOM2P54296 1465 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 COL4A3Q01955 1670 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 LRRC41Q15345 812 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 RTN1Q16799 776 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 FAM47AQ5JRC9 791 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 MIGA2Q7L4E1 593 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 TAOK1Q7L7X3 1001 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 OSTM1Q86WC4 334 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 SMC5Q8IY18 1101 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 SPATA18Q8TC71 538 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ZC3H15Q8WU90 426 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 PPM1EQ8WY54 764 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 MTMR7Q9Y216 660 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 UGGT2Q9NYU1 1516 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 K7ERI5 159 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ID4P47928 161 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PEX3P56589 373 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 SEMA3FQ13275 785 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 DCAF6Q58WW2 860 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 TRAPPC3LQ5T215 181 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ZC3H14Q6PJT7 736 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 CCDC116Q8IYX3 515 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 MAFAQ8NHW3 353 aaPredicted RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 ZCCHC14Q8WYQ9 949 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 DNAJC1Q96KC8 554 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 LRFN3Q9BTN0 628 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 NUF2Q9BZD4 464 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 AAASQ9NRG9 546 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PARP3Q9Y6F1 533 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 NDUFB9Q9Y6M9 179 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ARHGEF5Q12774 1597 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 CLIC2O15247 247 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 KDM1AO60341 852 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 NEFLP07196 543 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 THRAP10827 490 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 EPB42P16452 691 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 DPYDQ12882 1025 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 USP4Q13107 963 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 LASP1Q14847 261 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 FKBP15Q5T1M5 1219 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 CES5AQ6NT32 575 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 MRPL14Q6P1L8 145 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 LYSMD3Q7Z3D4 306 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 TMEM145Q8NBT3 493 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 TBC1D16Q8TBP0 767 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 TBC1D5Q92609 795 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 HPS3Q969F9 1004 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 LRGUKQ96M69 825 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 FRMD8Q9BZ67 464 aaPredicted RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 INTS2Q9H0H0 1204 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 AAMDCQ9H7C9 122 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 UPF2Q9HAU5 1272 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 FBXO8Q9NRD0 319 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 FRMD4BQ9Y2L6 1034 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PDE4DIPQ5VU43 2346 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ARHGEF10O15013 1369 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 RNF212BA8MTL3 300 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PRR33A8MZF0 331 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 GDF9O60383 454 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PRAMEF10O60809 474 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 AP1G2O75843 785 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ERLIN2O94905 339 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 CTNNA2P26232 953 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ACTN2P35609 894 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 PDE1AP54750 535 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 NHLH1Q02575 133 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 BMS1Q14692 1282 aaKnown RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 SLFNL1Q499Z3 407 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 WDR44Q5JSH3 913 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 SERTAD4-AS1Q5TG53 156 aa1.73□□□□□ -2.13
XRN1-214ENST00000498077 ZNF57Q68EA5 555 aaPredicted RBP1.73□□□□□ -2.13
XRN1-214ENST00000498077 SH3BP5LQ7L8J4 393 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms