RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CAPN6Q9Y6Q1 641 aa7.68□□□□□ -1.18
SMC4-227ENST00000497984 PKN1Q16512 942 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 SPOCD1Q6ZMY3 1216 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 ERICH6Q7L0X2 663 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 CILP2Q8IUL8 1156 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 MFSD4AQ8N468 514 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 MFSD2AQ8NA29 543 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 FAM53CQ9NYF3 392 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 TPX2Q9ULW0 747 aaKnown RBP7.67□□□□□ -1.18
SMC4-227ENST00000497984 TTF2Q9UNY4 1162 aaKnown RBP7.67□□□□□ -1.18
SMC4-227ENST00000497984 ST14Q9Y5Y6 855 aa7.67□□□□□ -1.18
SMC4-227ENST00000497984 FAM155AB1AL88 458 aaPredicted RBP7.66□□□□□ -1.18
SMC4-227ENST00000497984 AFMP43652 599 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 FGD1P98174 961 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 MLANAQ16655 118 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 CDKAL1Q5VV42 579 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 HID1Q8IV36 788 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 BHLHE22Q8NFJ8 381 aaPredicted RBP7.66□□□□□ -1.18
SMC4-227ENST00000497984 LIN37Q96GY3 246 aaPredicted RBP7.66□□□□□ -1.18
SMC4-227ENST00000497984 SLC38A3Q99624 504 aa7.66□□□□□ -1.18
SMC4-227ENST00000497984 H3BS24 57 aa7.65□□□□□ -1.18
SMC4-227ENST00000497984 CST3P01034 146 aaPredicted RBP7.65□□□□□ -1.18
SMC4-227ENST00000497984 LDHBP07195 334 aaKnown RBP7.65□□□□□ -1.18
SMC4-227ENST00000497984 ETF1P62495 437 aaKnown RBP7.65□□□□□ -1.18
SMC4-227ENST00000497984 LETMD1Q6P1Q0 360 aa7.65□□□□□ -1.18
SMC4-227ENST00000497984 NPAS4Q8IUM7 802 aa7.65□□□□□ -1.18
SMC4-227ENST00000497984 FRMD6Q96NE9 622 aa7.65□□□□□ -1.18
SMC4-227ENST00000497984 GFRA2O00451 464 aa7.64□□□□□ -1.19
SMC4-227ENST00000497984 GLI1P08151 1106 aa7.64□□□□□ -1.19
SMC4-227ENST00000497984 KCNA1Q09470 495 aa7.64□□□□□ -1.19
SMC4-227ENST00000497984 PRAMEF13Q5VWM6 474 aa7.64□□□□□ -1.19
SMC4-227ENST00000497984 KRTAP5-3Q6L8H2 238 aa7.64□□□□□ -1.19
SMC4-227ENST00000497984 PCDHB5Q9Y5E4 795 aa7.64□□□□□ -1.19
SMC4-227ENST00000497984 GNA15P30679 374 aa7.63□□□□□ -1.19
SMC4-227ENST00000497984 GRK4P32298 578 aa7.63□□□□□ -1.19
SMC4-227ENST00000497984 GDNFP39905 211 aa7.63□□□□□ -1.19
SMC4-227ENST00000497984 RPS26P62854 115 aaKnown RBP7.63□□□□□ -1.19
SMC4-227ENST00000497984 FBLN7Q53RD9 439 aa7.63□□□□□ -1.19
SMC4-227ENST00000497984 THAP5Q7Z6K1 395 aa7.63□□□□□ -1.19
SMC4-227ENST00000497984 KIRREL1Q96J84 757 aa7.63□□□□□ -1.19
SMC4-227ENST00000497984 EIF4BP23588 611 aaKnown RBP7.62□□□□□ -1.19
SMC4-227ENST00000497984 SEPT6Q14141 434 aa7.62□□□□□ -1.19
SMC4-227ENST00000497984 PRR23BQ6ZRT6 265 aa7.62□□□□□ -1.19
SMC4-227ENST00000497984 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
SMC4-227ENST00000497984 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
SMC4-227ENST00000497984 CBX7O95931 251 aa7.61□□□□□ -1.19
SMC4-227ENST00000497984 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
SMC4-227ENST00000497984 ZNF746Q6NUN9 644 aaPredicted RBP7.61□□□□□ -1.19
SMC4-227ENST00000497984 AGMOQ6ZNB7 445 aa7.61□□□□□ -1.19
SMC4-227ENST00000497984 RNF19AQ9NV58 838 aa7.61□□□□□ -1.19
SMC4-227ENST00000497984 TJP2Q9UDY2 1190 aa7.61□□□□□ -1.19
SMC4-227ENST00000497984 PRPF40AO75400 957 aaKnown RBP7.6□□□□□ -1.19
SMC4-227ENST00000497984 TNK2Q07912 1038 aa7.6□□□□□ -1.19
SMC4-227ENST00000497984 CDH24Q86UP0 819 aa7.6□□□□□ -1.19
SMC4-227ENST00000497984 MRPL41Q8IXM3 137 aaKnown RBP7.6□□□□□ -1.19
SMC4-227ENST00000497984 UBE2FQ969M7 185 aa7.6□□□□□ -1.19
SMC4-227ENST00000497984 COX4I2Q96KJ9 171 aa7.6□□□□□ -1.19
SMC4-227ENST00000497984 AK5Q9Y6K8 562 aa7.6□□□□□ -1.19
SMC4-227ENST00000497984 TSPAN15O95858 294 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 KRT1P04264 644 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 KIR3DL1P43629 444 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 LIG3P49916 1009 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 TMEM67Q5HYA8 995 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 ALPK1Q96QP1 1244 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 ZSWIM5Q9P217 1185 aa7.59□□□□□ -1.19
SMC4-227ENST00000497984 ESR1P03372 595 aa7.58□□□□□ -1.2
SMC4-227ENST00000497984 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
SMC4-227ENST00000497984 C1QL4Q86Z23 238 aa7.58□□□□□ -1.2
SMC4-227ENST00000497984 DPH2Q9BQC3 489 aaPredicted RBP7.58□□□□□ -1.2
SMC4-227ENST00000497984 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
SMC4-227ENST00000497984 PGRP06401 933 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 TFE3P19532 575 aaPredicted RBP7.57□□□□□ -1.2
SMC4-227ENST00000497984 CYP7A1P22680 504 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 CFPP27918 469 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 RAP1GAPP47736 663 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 SLC6A19Q695T7 634 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 MPZL3Q6UWV2 235 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 SYDE1Q6ZW31 735 aaPredicted RBP7.57□□□□□ -1.2
SMC4-227ENST00000497984 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 TMEM87BQ96K49 555 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 Q96M66 194 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 PPP1R16BQ96T49 567 aa7.57□□□□□ -1.2
SMC4-227ENST00000497984 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
SMC4-227ENST00000497984 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
SMC4-227ENST00000497984 MEI1Q5TIA1 1274 aa7.56□□□□□ -1.2
SMC4-227ENST00000497984 PIWIL2Q8TC59 973 aaKnown RBP7.56□□□□□ -1.2
SMC4-227ENST00000497984 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
SMC4-227ENST00000497984 DUSP9Q99956 384 aaKnown RBP7.56□□□□□ -1.2
SMC4-227ENST00000497984 SLAMF8Q9P0V8 285 aa7.56□□□□□ -1.2
SMC4-227ENST00000497984 DNAJC25-GNG10A0A024R161 153 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 LMNB1P20700 586 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 RALGPS1Q5JS13 557 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 TMPRSS7Q7RTY8 843 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 TTC6Q86TZ1 520 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 MCATQ8IVS2 390 aaKnown RBP7.55□□□□□ -1.2
SMC4-227ENST00000497984 ACSF2Q96CM8 615 aaPredicted RBP7.55□□□□□ -1.2
SMC4-227ENST00000497984 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
SMC4-227ENST00000497984 ETV3P41162 512 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms