RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 TFRCP02786 760 aaKnown RBP22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 FXR1P51114 621 aaKnown RBP eCLIP22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 DEFB118Q96PH6 123 aa22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 PAK6Q9NQU5 681 aaPredicted RBP22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 MORF4L1Q9UBU8 362 aa22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 SAP30BPQ9UHR5 308 aaKnown RBP22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 GJD2Q9UKL4 321 aa22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 MGAMO43451 1857 aa22.24■■□□□ 1.15
ATPAF2-209ENST00000497871 GDF11O95390 407 aa22.23■■□□□ 1.15
ATPAF2-209ENST00000497871 IRX3P78415 501 aaPredicted RBP22.23■■□□□ 1.15
ATPAF2-209ENST00000497871 P2RX7Q99572 595 aaKnown RBP22.23■■□□□ 1.15
ATPAF2-209ENST00000497871 ZBTB21Q9ULJ3 1066 aa22.23■■□□□ 1.15
ATPAF2-209ENST00000497871 MAP3K12Q12852 859 aa22.22■■□□□ 1.15
ATPAF2-209ENST00000497871 MAGEB6Q8N7X4 407 aa22.22■■□□□ 1.15
ATPAF2-209ENST00000497871 MIGA1Q8NAN2 632 aa22.22■■□□□ 1.15
ATPAF2-209ENST00000497871 EXOC6BQ9Y2D4 811 aa22.22■■□□□ 1.15
ATPAF2-209ENST00000497871 USP5P45974 858 aa22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 SHROOM1Q2M3G4 852 aaPredicted RBP22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 HSP90AB4PQ58FF6 505 aa22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 AACSQ86V21 672 aa22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 CRISPLD2Q9H0B8 497 aa22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 ANTXR1Q9H6X2 564 aa22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 NR2E3Q9Y5X4 410 aa22.21■■□□□ 1.15
ATPAF2-209ENST00000497871 HERVK_113P62684 666 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 TATDN1Q6P1N9 297 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 CHRDL2Q6WN34 429 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 GPRC5AQ8NFJ5 357 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 NDUFB9Q9Y6M9 179 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 ZBED9Q6R2W3 1325 aa22.2■■□□□ 1.14
ATPAF2-209ENST00000497871 HMGCRP04035 888 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 MS4A1P11836 297 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 USP17L2Q6R6M4 530 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 TTC6Q86TZ1 520 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 EHD4Q9H223 541 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 EMILIN3Q9NT22 766 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 SERPINB13Q9UIV8 391 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 LOC285556D6RIA3 1793 aa22.19■■□□□ 1.14
ATPAF2-209ENST00000497871 MAST2Q6P0Q8 1798 aa22.18■■□□□ 1.14
ATPAF2-209ENST00000497871 GH2P01242 217 aa22.18■■□□□ 1.14
ATPAF2-209ENST00000497871 GTF3C2Q8WUA4 911 aaPredicted RBP22.18■■□□□ 1.14
ATPAF2-209ENST00000497871 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.18■■□□□ 1.14
ATPAF2-209ENST00000497871 TXNRD2Q9NNW7 524 aa22.18■■□□□ 1.14
ATPAF2-209ENST00000497871 RBPJLQ9UBG7 517 aa22.18■■□□□ 1.14
ATPAF2-209ENST00000497871 RPTORQ8N122 1335 aa22.17■■□□□ 1.14
ATPAF2-209ENST00000497871 TTF1Q15361 905 aaPredicted RBP22.17■■□□□ 1.14
ATPAF2-209ENST00000497871 RHPN1Q8TCX5 695 aa22.17■■□□□ 1.14
ATPAF2-209ENST00000497871 HMX1Q9NP08 348 aaPredicted RBP22.17■■□□□ 1.14
ATPAF2-209ENST00000497871 IL1RAPL2Q9NP60 686 aa22.17■■□□□ 1.14
ATPAF2-209ENST00000497871 SIPA1L1O43166 1804 aa22.17■■□□□ 1.14
ATPAF2-209ENST00000497871 DOCK3Q8IZD9 2030 aa22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 ATAD5Q96QE3 1844 aa22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 MAPK4P31152 587 aa22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 Q3C1V9 767 aa22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 RPAP2Q8IXW5 612 aaPredicted RBP22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 NUDT12Q9BQG2 462 aa22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 RIOK1Q9BRS2 568 aaKnown RBP22.16■■□□□ 1.14
ATPAF2-209ENST00000497871 PEX10O60683 326 aa22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 XRCC5P13010 732 aaKnown RBP22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 CYP2B6P20813 491 aa22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 CERKLQ49MI3 558 aaPredicted RBP22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 NECAB2Q7Z6G3 386 aa22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 CLASRPQ8N2M8 674 aaKnown RBP22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 ANKLE1Q8NAG6 615 aa22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 PAWRQ96IZ0 340 aaKnown RBP22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 C12orf42Q96LP6 360 aa22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 RBM27Q9P2N5 1060 aaKnown RBP22.15■■□□□ 1.14
ATPAF2-209ENST00000497871 EVI5O60447 810 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 USP14P54578 494 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 ERVK-9P63128 1117 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 ERVK-24P63145 666 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 TRIM32Q13049 653 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 SOCS4Q8WXH5 440 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 TRIB2Q92519 343 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 KIF1BPQ96EK5 621 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 TRIOBPQ9H2D6 2365 aa22.14■■□□□ 1.13
ATPAF2-209ENST00000497871 MAGEB6P1A0A0J9YX57 407 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L15C9J2P7 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L13C9JLJ4 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L11C9JVI0 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L18D6R9N7 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L22D6RA61 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L17D6RBQ6 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L19D6RCP7 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L20D6RJB6 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 PLCD1P51178 756 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 USP17L24Q0WX57 530 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 RAB3GAP1Q15042 981 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 ABCB5Q2M3G0 1257 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 SLC9C2Q5TAH2 1124 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 CCAR1Q8IX12 1150 aaKnown RBP22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 TRMT44Q8IYL2 757 aaKnown RBP22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 PRO3102Q9H379 93 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 CABP5Q9NP86 173 aa22.13■■□□□ 1.13
ATPAF2-209ENST00000497871 MYO5AQ9Y4I1 1855 aaKnown RBP22.12■■□□□ 1.13
ATPAF2-209ENST00000497871 HMMRO75330 724 aa22.12■■□□□ 1.13
ATPAF2-209ENST00000497871 PDE3AQ14432 1141 aa22.12■■□□□ 1.13
ATPAF2-209ENST00000497871 MAP3K21Q5TCX8 1036 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms