RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 JAG1P78504 1218 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 SWAP70Q9UH65 585 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 LIMCH1Q9UPQ0 1083 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 WDR90Q96KV7 1748 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 TSPY2A6NKD2 308 aa28.56■■■□□ 2.16
TNFRSF4-203ENST00000497869 IFIT3O14879 490 aaKnown RBP28.56■■■□□ 2.16
TNFRSF4-203ENST00000497869 TNNI2P48788 182 aa28.56■■■□□ 2.16
TNFRSF4-203ENST00000497869 TNFAIP1Q13829 316 aa28.56■■■□□ 2.16
TNFRSF4-203ENST00000497869 TATDN1Q6P1N9 297 aa28.56■■■□□ 2.16
TNFRSF4-203ENST00000497869 MCM2P49736 904 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 TMEM67Q5HYA8 995 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 USP50Q70EL3 339 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 MIGA2Q7L4E1 593 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 APOBEC3FQ8IUX4 373 aaKnown RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 ZNF444Q8N0Y2 327 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 CRACR2BQ8N4Y2 399 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 ENAHQ8N8S7 591 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 IL27Q8NEV9 243 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 TMEM87BQ96K49 555 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 ZSCAN10Q96SZ4 725 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 ANGEL1Q9UNK9 670 aaKnown RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 TNKSO95271 1327 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 POTEIP0CG38 1075 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 POTEJP0CG39 1038 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 EVCP57679 992 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 BECN1Q14457 450 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 NBPF12Q5TAG4 269 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 RCSD1Q6JBY9 416 aa28.55■■■□□ 2.16
TNFRSF4-203ENST00000497869 MAP3K10Q02779 954 aa28.54■■■□□ 2.16
TNFRSF4-203ENST00000497869 NEDD1Q8NHV4 660 aa28.54■■■□□ 2.16
TNFRSF4-203ENST00000497869 DTNBO60941 627 aa28.53■■■□□ 2.16
TNFRSF4-203ENST00000497869 FGD1P98174 961 aa28.53■■■□□ 2.16
TNFRSF4-203ENST00000497869 ANKRD1Q15327 319 aa28.53■■■□□ 2.16
TNFRSF4-203ENST00000497869 ZNF287Q9HBT7 754 aa28.53■■■□□ 2.16
TNFRSF4-203ENST00000497869 PITPNM2Q9BZ72 1349 aa28.53■■■□□ 2.16
TNFRSF4-203ENST00000497869 TSPY3P0CV98 308 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 TSPY8P0CW00 308 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 CLEC10AQ8IUN9 316 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 NECAB1Q8N987 351 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 SPRYD3Q8NCJ5 442 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 IQCA1LA6NCM1 817 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 ADM5C9JUS6 153 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 RAB11FIP4Q86YS3 637 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 UBAC1Q9BSL1 405 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 MTA3Q9BTC8 594 aa28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 HERC5Q9UII4 1024 aaKnown RBP28.52■■■□□ 2.16
TNFRSF4-203ENST00000497869 IGKV6D-41A0A0C4DH26 115 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 DCAF8L1A6NGE4 600 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 TBC1D12O60347 775 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 LIFRP42702 1097 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 SGMS1Q86VZ5 419 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 RRAGCQ9HB90 399 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 TCP11L1Q9NUJ3 509 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 HPS5Q9UPZ3 1129 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 SSC5DA1L4H1 1573 aa28.51■■■□□ 2.15
TNFRSF4-203ENST00000497869 PDIA3P30101 505 aaKnown RBP28.5■■■□□ 2.15
TNFRSF4-203ENST00000497869 CUL4AQ13619 759 aa28.5■■■□□ 2.15
TNFRSF4-203ENST00000497869 EAPPQ56P03 285 aaPredicted RBP28.5■■■□□ 2.15
TNFRSF4-203ENST00000497869 IQCA1Q86XH1 822 aa28.5■■■□□ 2.15
TNFRSF4-203ENST00000497869 SCN4AP35499 1836 aa28.5■■■□□ 2.15
TNFRSF4-203ENST00000497869 PLIN4Q96Q06 1357 aa28.5■■■□□ 2.15
TNFRSF4-203ENST00000497869 KLF18A0A0U1RQI7 1052 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 GDF11O95390 407 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 GUCY1A2P33402 732 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 STK3Q13188 491 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 WTAPQ15007 396 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 FOXD4L1Q9NU39 408 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 FZD1Q9UP38 647 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 NOVP48745 357 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 CERKLQ49MI3 558 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 CEP95Q96GE4 821 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 MYL10Q9BUA6 226 aa28.49■■■□□ 2.15
TNFRSF4-203ENST00000497869 PHF20L1A8MW92 1017 aa28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 NT5C2P49902 561 aa28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 ZC3H15Q8WU90 426 aaKnown RBP28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 DCPSQ96C86 337 aaKnown RBP28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 TRIM34Q9BYJ4 488 aa28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 NMRK2Q9NPI5 230 aa28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 TAOK2Q9UL54 1235 aa28.48■■■□□ 2.15
TNFRSF4-203ENST00000497869 RXRAP19793 462 aa28.47■■■□□ 2.15
TNFRSF4-203ENST00000497869 APOA5Q6Q788 366 aa28.47■■■□□ 2.15
TNFRSF4-203ENST00000497869 ANKS1AQ92625 1134 aa28.47■■■□□ 2.15
TNFRSF4-203ENST00000497869 SCRN1Q12765 414 aa28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 SART3Q15020 963 aaKnown RBP28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 ZNF526Q8TF50 670 aaPredicted RBP28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 ZNF274Q96GC6 653 aaPredicted RBP28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 ZSCAN31Q96LW9 406 aaPredicted RBP28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 KRT26Q7Z3Y9 468 aa28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 SIAH1Q8IUQ4 282 aa28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 CCDC83Q8IWF9 413 aa28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 CCDC17Q96LX7 622 aa28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 NCOA5Q9HCD5 579 aaKnown RBP28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 PPP2R3BQ9Y5P8 575 aa28.46■■■□□ 2.15
TNFRSF4-203ENST00000497869 ERICH2A1L162 156 aa28.45■■■□□ 2.14
TNFRSF4-203ENST00000497869 PFKFB2O60825 505 aa28.45■■■□□ 2.14
TNFRSF4-203ENST00000497869 IFIT1BQ5T764 474 aaKnown RBP28.45■■■□□ 2.14
TNFRSF4-203ENST00000497869 USP48Q86UV5 1035 aa28.45■■■□□ 2.14
TNFRSF4-203ENST00000497869 DGKHQ86XP1 1220 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms