RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.32
TOM1-217ENST00000497448 SEMA3EO15041 775 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 SNX17Q15036 470 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 ATP2B3Q16720 1220 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 TRIM60Q495X7 471 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 MFSD14CQ5VZR4 134 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 SH3RF1Q7Z6J0 888 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 ADAMTS19Q8TE59 1207 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 RNPC3Q96LT9 517 aaKnown RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.33
TOM1-217ENST00000497448 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.33
TOM1-217ENST00000497448 TRIM43BA6NCK2 446 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 DNAJB2P25686 324 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 CNGA1P29973 690 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 BACE1P56817 501 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 GJC2Q5T442 439 aaPredicted RBP13.01□□□□□ -0.33
TOM1-217ENST00000497448 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 TRPV1Q8NER1 839 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
TOM1-217ENST00000497448 ATXN2LQ8WWM7 1075 aaKnown RBP13.01□□□□□ -0.33
TOM1-217ENST00000497448 TRIM43Q96BQ3 446 aaPredicted RBP13.01□□□□□ -0.33
TOM1-217ENST00000497448 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
TOM1-217ENST00000497448 XIRP2A4UGR9 3374 aa13□□□□□ -0.33
TOM1-217ENST00000497448 FOCADQ5VW36 1801 aa13□□□□□ -0.33
TOM1-217ENST00000497448 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
TOM1-217ENST00000497448 CYBAP13498 195 aa13□□□□□ -0.33
TOM1-217ENST00000497448 EPHB4P54760 987 aa13□□□□□ -0.33
TOM1-217ENST00000497448 SLF2Q8IX21 1173 aa13□□□□□ -0.33
TOM1-217ENST00000497448 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
TOM1-217ENST00000497448 ASB2Q96Q27 587 aa13□□□□□ -0.33
TOM1-217ENST00000497448 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
TOM1-217ENST00000497448 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
TOM1-217ENST00000497448 ABCF2Q9UG63 623 aa13□□□□□ -0.33
TOM1-217ENST00000497448 REV3LO60673 3130 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 KBTBD13C9JR72 458 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 ZBTB22O15209 634 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 CNMDO75829 334 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 ITGB8P26012 769 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 CYP2C19P33261 490 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 JAG1P78504 1218 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 RASGRF1Q13972 1273 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 SHROOM1Q2M3G4 852 aaPredicted RBP12.99□□□□□ -0.33
TOM1-217ENST00000497448 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 NDUFB9Q9Y6M9 179 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 PLXNA1Q9UIW2 1896 aa12.99□□□□□ -0.33
TOM1-217ENST00000497448 NCOR1O75376 2440 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
TOM1-217ENST00000497448 SYNGAP1Q96PV0 1343 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 ADORA1P30542 326 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 CCDC102BQ68D86 513 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 NPLOC4Q8TAT6 608 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 ZNF576Q9H609 170 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
TOM1-217ENST00000497448 CHD9Q3L8U1 2897 aa12.98□□□□□ -0.33
TOM1-217ENST00000497448 C19orf81C9J6K1 198 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 USP17L10C9JJH3 530 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 IGHA2P01877 340 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 ASNSP08243 561 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 HOXC6P09630 235 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 PTPREP23469 700 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 ATP2B2Q01814 1243 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 MECOMQ03112 1051 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 GRB14Q14449 540 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 C1orf53Q5VUE5 145 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 TIFAQ96CG3 184 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
TOM1-217ENST00000497448 SIL1Q9H173 461 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
TOM1-217ENST00000497448 TCF20Q9UGU0 1960 aaKnown RBP12.97□□□□□ -0.33
TOM1-217ENST00000497448 BDP1A6H8Y1 2624 aa12.96□□□□□ -0.33
TOM1-217ENST00000497448 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.33
TOM1-217ENST00000497448 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
TOM1-217ENST00000497448 GDF11O95390 407 aa12.96□□□□□ -0.33
TOM1-217ENST00000497448 MRPS5P82675 430 aaKnown RBP12.96□□□□□ -0.33
TOM1-217ENST00000497448 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
TOM1-217ENST00000497448 ARRDC4Q8NCT1 418 aa12.96□□□□□ -0.33
TOM1-217ENST00000497448 EMILIN3Q9NT22 766 aa12.96□□□□□ -0.33
TOM1-217ENST00000497448 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
TOM1-217ENST00000497448 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.34
TOM1-217ENST00000497448 GBF1Q92538 1859 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 CHD7Q9P2D1 2997 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.95□□□□□ -0.34
TOM1-217ENST00000497448 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.95□□□□□ -0.34
TOM1-217ENST00000497448 CIAO1O76071 339 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
TOM1-217ENST00000497448 CLTBP09497 229 aa12.95□□□□□ -0.34
TOM1-217ENST00000497448 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms