RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 NEFMP07197 916 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 ERCC5P28715 1186 aaPredicted RBP5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 TNNI2P48788 182 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 RBM6P78332 1123 aaKnown RBP5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 PDE3AQ14432 1141 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 ZNF654Q8IZM8 581 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 GOLM1Q8NBJ4 401 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 RASGRP4Q8TDF6 673 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 PLPPR2Q96GM1 343 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 NT5C1AQ9BXI3 368 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 MIR1-1HGQ9H1L0 117 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 POLR3KQ9Y2Y1 108 aaPredicted RBP5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 ACTL7BQ9Y614 415 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 LRP6O75581 1613 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 USP19O94966 1318 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 A0A0C4DFX4 3053 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 VWDEQ8N2E2 1590 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 POGZQ7Z3K3 1410 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 ERVK-24P63145 666 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 ID3Q02535 119 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 RPL6Q02878 288 aaKnown RBP5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 PAK2Q13177 524 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 HP1BP3Q5SSJ5 553 aaPredicted RBP5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 NUTM2GQ5VZR2 741 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 NOL8Q76FK4 1167 aaKnown RBP5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 UBE3DQ7Z6J8 389 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 KIAA0825Q8IV33 1275 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 TMEM151AQ8N4L1 468 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 FANCD2OSQ96PS1 177 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 CYP4F12Q9HCS2 524 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 FAM105AQ9NUU6 356 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 UBP1Q9NZI7 540 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 PCDHA4Q9UN74 947 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 SUPT16HQ9Y5B9 1047 aaKnown RBP5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 PRR36Q9H6K5 1346 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 ARAP3Q8WWN8 1544 aa5.17□□□□□ -1.58
EXOSC3-208ENST00000496910 NWD1Q149M9 1564 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 GRIN2AQ12879 1464 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 GRIN2BQ13224 1484 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 GLB1P16278 677 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 MLECQ14165 292 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 MPP2Q14168 576 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 AKAP4Q5JQC9 854 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 WIPI1Q5MNZ9 446 aaPredicted RBP5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 SNAP47Q5SQN1 464 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 REC114Q7Z4M0 266 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 SLITRK4Q8IW52 837 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 EZH1Q92800 747 aaPredicted RBP5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 MYRFLQ96LU7 910 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 SPON2Q9BUD6 331 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 LNPKQ9C0E8 428 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 ACSS3Q9H6R3 686 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 TPSG1Q9NRR2 321 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 HIF3AQ9Y2N7 669 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 SHANK3Q9BYB0 1731 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 PEG3Q9GZU2 1588 aa5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 XIRP1Q702N8 1843 aaKnown RBP5.16□□□□□ -1.58
EXOSC3-208ENST00000496910 FHOD3Q2V2M9 1422 aa5.15□□□□□ -1.58
EXOSC3-208ENST00000496910 CUL7Q14999 1698 aa5.15□□□□□ -1.58
EXOSC3-208ENST00000496910 MAGI3Q5TCQ9 1506 aa5.15□□□□□ -1.58
EXOSC3-208ENST00000496910 DCDC2CA8MYV0 355 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 R3HDM1Q15032 1099 aaKnown RBP5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 UVSSAQ2YD98 709 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 PPM1JQ5JR12 505 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 ZBTB37Q5TC79 503 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 CDPF1Q6NVV7 123 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 FDX2Q6P4F2 183 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 SEZ6L2Q6UXD5 910 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 C12orf40Q86WS4 652 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 MICAL1Q8TDZ2 1067 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 JARID2Q92833 1246 aaPredicted RBP5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 DNAJC2Q99543 621 aaKnown RBP5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 SPOCK3Q9BQ16 436 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 CEP41Q9BYV8 373 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 TACC3Q9Y6A5 838 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 SNCAIPQ9Y6H5 919 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 ROBO2Q9HCK4 1378 aa5.15□□□□□ -1.59
EXOSC3-208ENST00000496910 NUP160Q12769 1436 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 DNAJA2O60884 412 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 RAB11FIP3O75154 756 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 GATA4P43694 442 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 SGO2Q562F6 1265 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 TMED8Q6PL24 325 aaPredicted RBP5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 NOP9Q86U38 636 aaKnown RBP5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 FAM20CQ8IXL6 584 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 C12orf50Q8NA57 414 aaPredicted RBP5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 RNF214Q8ND24 703 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 SLC17A8Q8NDX2 589 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 ACSBG1Q96GR2 724 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 GPATCH3Q96I76 525 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 AP4E1Q9UPM8 1137 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 CORINQ9Y5Q5 1042 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 CSADQ9Y600 493 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 RNF17Q9BXT8 1623 aaKnown RBP5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 SBNO2Q9Y2G9 1366 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 SIGLEC1Q9BZZ2 1709 aa5.14□□□□□ -1.59
EXOSC3-208ENST00000496910 RAD54L2Q9Y4B4 1467 aa5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 TLR3O15455 904 aaKnown RBP5.13□□□□□ -1.59
EXOSC3-208ENST00000496910 DYNC1LI2O43237 492 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms