RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 TRAF5O00463 557 aa16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 HMGB1P09429 215 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 CYB5R4Q7L1T6 521 aa16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 ZNF444Q8N0Y2 327 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 ZSWIM5Q9P217 1185 aa16.49■□□□□ 0.23
ATPAF2-208ENST00000496852 PTPRFP10586 1907 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 RANBP6O60518 1105 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 ITGBL1O95965 494 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 CPA1P15085 419 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 ANTXR2P58335 489 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 FMR1Q06787 632 aaKnown RBP eCLIP16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 ZNF112Q9UJU3 913 aa16.48■□□□□ 0.23
ATPAF2-208ENST00000496852 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 AKR1B1P15121 316 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 MCM5P33992 734 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 TFAP4Q01664 338 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 DHX32Q7L7V1 743 aaKnown RBP16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 FZD1Q9UP38 647 aa16.47■□□□□ 0.23
ATPAF2-208ENST00000496852 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 USP2O75604 605 aaPredicted RBP16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 NF2P35240 595 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 RABEP1Q15276 862 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 NEDD1Q8NHV4 660 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 CAP2P40123 477 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 JAG1P78504 1218 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 CHST3Q7LGC8 479 aa16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
ATPAF2-208ENST00000496852 PRC1O43663 620 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 TOMM70O94826 608 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 GDF11O95390 407 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 TTC14Q96N46 770 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 IL17RBQ9NRM6 502 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 TCP11L1Q9NUJ3 509 aa16.45■□□□□ 0.22
ATPAF2-208ENST00000496852 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 INPP5BP32019 993 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 NEK4P51957 841 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 PRKG1Q13976 671 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 SMC1BQ8NDV3 1235 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 RBM46Q8TBY0 533 aaKnown RBP16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 ZKSCAN3Q9BRR0 538 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 AGXT2Q9BYV1 514 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 PASKQ96RG2 1323 aa16.44■□□□□ 0.22
ATPAF2-208ENST00000496852 NMT2O60551 498 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 GH2P01242 217 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 SEC23AQ15436 765 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 TMEM179Q6ZVK1 233 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 FBXL16Q8N461 479 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 IGDCC4Q8TDY8 1250 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 ZBTB21Q9ULJ3 1066 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 TNKSO95271 1327 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 IREB2P48200 963 aaKnown RBP16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 NOVP48745 357 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 GINM1Q9NU53 330 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 PDRG1Q9NUG6 133 aa16.43■□□□□ 0.22
ATPAF2-208ENST00000496852 SH2B2O14492 632 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 ASNSP08243 561 aa16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 SEPT2Q15019 361 aa16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 Q6ZUG5 572 aa16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
ATPAF2-208ENST00000496852 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms