RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 GABRQQ9UN88 632 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 MYH1P12882 1939 aa18.31■□□□□ 0.52
NEK4-206ENST00000496822 MAGEB6P1A0A0J9YX57 407 aa18.31■□□□□ 0.52
NEK4-206ENST00000496822 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
NEK4-206ENST00000496822 EVX2Q03828 476 aa18.31■□□□□ 0.52
NEK4-206ENST00000496822 ANKRD13CQ8N6S4 541 aa18.31■□□□□ 0.52
NEK4-206ENST00000496822 RAET1EQ8TD07 263 aa18.31■□□□□ 0.52
NEK4-206ENST00000496822 PNMA3Q9UL41 463 aa18.31■□□□□ 0.52
NEK4-206ENST00000496822 CHGBP05060 677 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 HOXD10P28358 340 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 PLCD1P51178 756 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 BACE1P56817 501 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 MTFR1Q15390 333 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 LCORLQ8N3X6 602 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 TMEM106CQ9BVX2 250 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 ASCC2Q9H1I8 757 aaPredicted RBP18.3■□□□□ 0.52
NEK4-206ENST00000496822 EHD4Q9H223 541 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 PAG1Q9NWQ8 432 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 MGAMO43451 1857 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
NEK4-206ENST00000496822 KIAA0100Q14667 2235 aaKnown RBP18.3■□□□□ 0.52
NEK4-206ENST00000496822 GH2P01242 217 aa18.29■□□□□ 0.52
NEK4-206ENST00000496822 ATP5JP18859 108 aa18.29■□□□□ 0.52
NEK4-206ENST00000496822 GRK4P32298 578 aa18.29■□□□□ 0.52
NEK4-206ENST00000496822 TATDN1Q6P1N9 297 aa18.29■□□□□ 0.52
NEK4-206ENST00000496822 SERPINB13Q9UIV8 391 aa18.29■□□□□ 0.52
NEK4-206ENST00000496822 FAM110CQ1W6H9 321 aa18.28■□□□□ 0.52
NEK4-206ENST00000496822 PRPF38BQ5VTL8 546 aaKnown RBP18.28■□□□□ 0.52
NEK4-206ENST00000496822 SDR42E1Q8WUS8 393 aa18.28■□□□□ 0.52
NEK4-206ENST00000496822 HAUS7Q99871 368 aa18.28■□□□□ 0.52
NEK4-206ENST00000496822 CRNKL1Q9BZJ0 848 aaKnown RBP18.28■□□□□ 0.52
NEK4-206ENST00000496822 GINM1Q9NU53 330 aa18.28■□□□□ 0.52
NEK4-206ENST00000496822 USP17L10C9JJH3 530 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 TNPO2O14787 897 aaKnown RBP18.27■□□□□ 0.52
NEK4-206ENST00000496822 PEX10O60683 326 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 SHMT1P34896 483 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 ADD2P35612 726 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 FLT3LGP49771 235 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 PABPC4Q13310 644 aaKnown RBP eCLIP18.27■□□□□ 0.52
NEK4-206ENST00000496822 TTC6Q86TZ1 520 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 ARMT1Q9H993 441 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 TMOD4Q9NZQ9 345 aa18.27■□□□□ 0.52
NEK4-206ENST00000496822 CYP2D6P10635 497 aa18.26■□□□□ 0.51
NEK4-206ENST00000496822 GABPAQ06546 454 aa18.26■□□□□ 0.51
NEK4-206ENST00000496822 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
NEK4-206ENST00000496822 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
NEK4-206ENST00000496822 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
NEK4-206ENST00000496822 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
NEK4-206ENST00000496822 PRKAB2O43741 272 aa18.25■□□□□ 0.51
NEK4-206ENST00000496822 MBD4O95243 580 aa18.25■□□□□ 0.51
NEK4-206ENST00000496822 POLR3DP05423 398 aaPredicted RBP18.25■□□□□ 0.51
NEK4-206ENST00000496822 ELNP15502 786 aa18.25■□□□□ 0.51
NEK4-206ENST00000496822 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
NEK4-206ENST00000496822 IRX3P78415 501 aaPredicted RBP18.25■□□□□ 0.51
NEK4-206ENST00000496822 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
NEK4-206ENST00000496822 CERKLQ49MI3 558 aaPredicted RBP18.25■□□□□ 0.51
NEK4-206ENST00000496822 SLAIN1Q8ND83 568 aa18.25■□□□□ 0.51
NEK4-206ENST00000496822 DCTPP1Q9H773 170 aa18.25■□□□□ 0.51
NEK4-206ENST00000496822 DCP1AQ9NPI6 582 aaPredicted RBP18.25■□□□□ 0.51
NEK4-206ENST00000496822 ADCY3O60266 1144 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
NEK4-206ENST00000496822 GUCY1A2P33402 732 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 RAB3GAP1Q15042 981 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 TSHZ3Q63HK5 1081 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 SLC44A5Q8NCS7 719 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
NEK4-206ENST00000496822 TXNRD2Q9NNW7 524 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
NEK4-206ENST00000496822 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
NEK4-206ENST00000496822 SMIM22K7EJ46 135 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 CCL5P13501 91 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 HERVK_113P62684 666 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 IRF5Q13568 498 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 POTEEQ6S8J3 1075 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 ACER1Q8TDN7 264 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 FEZ1Q99689 392 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 PCDHB15Q9Y5E8 787 aa18.23■□□□□ 0.51
NEK4-206ENST00000496822 RRP1P56182 461 aaKnown RBP18.22■□□□□ 0.51
NEK4-206ENST00000496822 COA7Q96BR5 231 aa18.22■□□□□ 0.51
NEK4-206ENST00000496822 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
NEK4-206ENST00000496822 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.22■□□□□ 0.51
NEK4-206ENST00000496822 UNC93B1Q9H1C4 597 aa18.22■□□□□ 0.51
NEK4-206ENST00000496822 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
NEK4-206ENST00000496822 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
NEK4-206ENST00000496822 CYP2D7A0A087X1C5 515 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 INHAP05111 366 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 UBXN2AP68543 259 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 SEPT2Q15019 361 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 UBE3CQ15386 1083 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 PUS7LQ9H0K6 701 aaKnown RBP18.21■□□□□ 0.51
NEK4-206ENST00000496822 RNF208Q9H0X6 261 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 RBPJLQ9UBG7 517 aa18.21■□□□□ 0.51
NEK4-206ENST00000496822 MYH7P12883 1935 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms