RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SP3Q02447 781 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 NUCB1Q02818 461 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 CERKLQ49MI3 558 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 TATDN1Q6P1N9 297 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 PRRT2Q7Z6L0 340 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 EXOC6Q8TAG9 804 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 GTF3C2Q8WUA4 911 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 BRI3BPQ8WY22 251 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 DCP1AQ9NPI6 582 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-214ENST00000496633 AFG3L2Q9Y4W6 797 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 MYH1P12882 1939 aa9.11□□□□□ -0.95
CDHR3-214ENST00000496633 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 MBD4O95243 580 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 TBC1D8O95759 1140 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 OSBPP22059 807 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 GJA5P36382 358 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 GCLCP48506 637 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-214ENST00000496633 CRHR2Q13324 411 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 SBK1Q52WX2 424 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 SH3D19Q5HYK7 790 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 PI4K2BQ8TCG2 481 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 ZNF296Q8WUU4 475 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-214ENST00000496633 SAP30BPQ9UHR5 308 aaKnown RBP9.1□□□□□ -0.95
CDHR3-214ENST00000496633 AGTPBP1Q9UPW5 1226 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 SLC4A4Q9Y6R1 1079 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 CDK5RAP2Q96SN8 1893 aa9.1□□□□□ -0.95
CDHR3-214ENST00000496633 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 NAV1Q8NEY1 1877 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 PDHXO00330 501 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 BACE1P56817 501 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 SPP2Q13103 211 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 DGKZQ13574 1117 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 ABCB5Q2M3G0 1257 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 TMEM179Q6ZVK1 233 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 LCORLQ8N3X6 602 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
CDHR3-214ENST00000496633 STRBPQ96SI9 672 aaKnown RBP9.09□□□□□ -0.95
CDHR3-214ENST00000496633 PTPN18Q99952 460 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 ARMT1Q9H993 441 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 HELLSQ9NRZ9 838 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 TSKSQ9UJT2 592 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 ZBTB21Q9ULJ3 1066 aa9.09□□□□□ -0.95
CDHR3-214ENST00000496633 TRIM75PA6NK02 468 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 PATL2C9JE40 543 aaKnown RBP9.08□□□□□ -0.96
CDHR3-214ENST00000496633 GPAA1O43292 621 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 APPP05067 770 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 PCP11498 1178 aaKnown RBP9.08□□□□□ -0.96
CDHR3-214ENST00000496633 CAPN2P17655 700 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 TDO2P48775 406 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 GABPAQ06546 454 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 PDE4BQ07343 736 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 FBXO46Q6PJ61 603 aaPredicted RBP9.08□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L2Q6R6M4 530 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 GADL1Q6ZQY3 521 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 NBPF11Q86T75 865 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 FAM43AQ8N2R8 423 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 SDR42E1Q8WUS8 393 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
CDHR3-214ENST00000496633 FEZ1Q99689 392 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 CASP8AP2Q9UKL3 1982 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 ATAD5Q96QE3 1844 aa9.08□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L12C9JPN9 530 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 USP17L21D6R901 530 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 NEFLP07196 543 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 HOXA7P31268 230 aaPredicted RBP9.07□□□□□ -0.96
CDHR3-214ENST00000496633 IRX3P78415 501 aaPredicted RBP9.07□□□□□ -0.96
CDHR3-214ENST00000496633 ZMYM1Q5SVZ6 1142 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 B4GALNT3Q6L9W6 998 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 C16orf86Q6ZW13 317 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 LPAR1Q92633 364 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 KIAA1683Q9H0B3 1180 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 PUS7LQ9H0K6 701 aaKnown RBP9.07□□□□□ -0.96
CDHR3-214ENST00000496633 NAPBQ9H115 298 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 KANSL2Q9H9L4 492 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 MKNK2Q9HBH9 465 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 SYNPO2Q9UMS6 1093 aa9.07□□□□□ -0.96
CDHR3-214ENST00000496633 MPHOSPH10O00566 681 aaKnown RBP9.06□□□□□ -0.96
CDHR3-214ENST00000496633 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
CDHR3-214ENST00000496633 GH2P01242 217 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 CENPBP07199 599 aaPredicted RBP9.06□□□□□ -0.96
CDHR3-214ENST00000496633 PLCD1P51178 756 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 FCGRTP55899 365 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 LACTBP83111 547 aaPredicted RBP9.06□□□□□ -0.96
CDHR3-214ENST00000496633 RAB3GAP1Q15042 981 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 MCMDC2Q4G0Z9 681 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 C17orf99Q6UX52 265 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 ZNF444Q8N0Y2 327 aaPredicted RBP9.06□□□□□ -0.96
CDHR3-214ENST00000496633 RUFY2Q8WXA3 655 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 OSBP2Q969R2 916 aa9.06□□□□□ -0.96
CDHR3-214ENST00000496633 ABHD8Q96I13 439 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms