RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ZDHHC9Q9Y397 364 aa7.24□□□□□ -1.25
SSBP1-213ENST00000496622 MCM4P33991 863 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 GGCXP38435 758 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 SLC19A1P41440 591 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 RASGRF1Q13972 1273 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 EZH2Q15910 746 aaKnown RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 SLC9C2Q5TAH2 1124 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 GPR101Q96P66 508 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 MYCBPQ99417 103 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 HMX1Q9NP08 348 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 INCENPQ9NQS7 918 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.23□□□□□ -1.253e-8■■■■■ 34.9
SSBP1-213ENST00000496622 MAST3O60307 1309 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 FOXP2O15409 715 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 HSPD1P10809 573 aaKnown RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 NFIXQ14938 502 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 CCDC152Q4G0S7 254 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 PARP10Q53GL7 1025 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 STOX1Q6ZVD7 989 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 GET4Q7L5D6 327 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 TTC14Q96N46 770 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-213ENST00000496622 GPR108Q9NPR9 543 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 NARFQ9UHQ1 456 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 ZNF652Q9Y2D9 606 aa7.23□□□□□ -1.25
SSBP1-213ENST00000496622 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 ESPNB1AK53 854 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 SMIM22K7EJ46 135 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 MPHOSPH10O00566 681 aaKnown RBP7.22□□□□□ -1.25
SSBP1-213ENST00000496622 ZKSCAN1P17029 563 aaPredicted RBP7.22□□□□□ -1.25
SSBP1-213ENST00000496622 JUNDP17535 347 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 RAB3GAP1Q15042 981 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 ME3Q16798 604 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 TXNRD3Q86VQ6 643 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 CCDC83Q8IWF9 413 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 GDPD2Q9HCC8 539 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 PDRG1Q9NUG6 133 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 BSDC1Q9NW68 430 aaPredicted RBP7.22□□□□□ -1.25
SSBP1-213ENST00000496622 TFCP2L1Q9NZI6 479 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 HMG20BQ9P0W2 317 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 TPCN1Q9ULQ1 816 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 PDE4DIPQ5VU43 2346 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 IGHMBP2P38935 993 aaKnown RBP7.22□□□□□ -1.25
SSBP1-213ENST00000496622 ST3GAL1Q11201 340 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 CLEC4GQ6UXB4 293 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 TRIM67Q6ZTA4 783 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 RAB11FIP4Q86YS3 637 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 CCDC97Q96F63 343 aaPredicted RBP7.22□□□□□ -1.25
SSBP1-213ENST00000496622 ABCF2Q9UG63 623 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 SBF2Q86WG5 1849 aa7.22□□□□□ -1.25
SSBP1-213ENST00000496622 CCDC85CA6NKD9 419 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 RNF113AO15541 343 aaKnown RBP7.21□□□□□ -1.25
SSBP1-213ENST00000496622 AP1G2O75843 785 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 FGFR2P21802 821 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 PUM3Q15397 648 aaKnown RBP7.21□□□□□ -1.25
SSBP1-213ENST00000496622 LINC01559Q495D7 138 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 L1TD1Q5T7N2 865 aaKnown RBP7.21□□□□□ -1.25
SSBP1-213ENST00000496622 SDR16C5Q8N3Y7 309 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 LPIN2Q92539 896 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 CYP46A1Q9Y6A2 500 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.25
SSBP1-213ENST00000496622 HIP1O00291 1037 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 CCT2P78371 535 aaKnown RBP7.21□□□□□ -1.26
SSBP1-213ENST00000496622 FOXC1Q12948 553 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
SSBP1-213ENST00000496622 ZMYM1Q5SVZ6 1142 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 SPRYD7Q5W111 196 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 MCTP1Q6DN14 999 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 MIGA1Q8NAN2 632 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 ITFG2Q969R8 447 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 NLRP3Q96P20 1036 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 MINPP1Q9UNW1 487 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 PCNTO95613 3336 aa7.21□□□□□ -1.26
SSBP1-213ENST00000496622 GPAA1O43292 621 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 FGAP02671 866 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 CTHP32929 405 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 RHBDL3P58872 404 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 TRIM32Q13049 653 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 TXNRD1Q16881 649 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
SSBP1-213ENST00000496622 MSL1Q68DK7 614 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 BLOC1S2Q6QNY1 142 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 OLFM4Q6UX06 510 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 TPTE2Q6XPS3 522 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 CREBRFQ8IUR6 639 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 ANKRD18AQ8IVF6 992 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 EFCC1Q9HA90 598 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 ZNF532Q9HCE3 1301 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 TUBGCP6Q96RT7 1819 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 PRKAB2O43741 272 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 NRDCO43847 1150 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 TRAK2O60296 914 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 APBA3O96018 575 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 RFC5P40937 340 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 RPS8P62241 208 aaKnown RBP7.2□□□□□ -1.26
SSBP1-213ENST00000496622 TOB2Q14106 344 aaPredicted RBP7.2□□□□□ -1.26
SSBP1-213ENST00000496622 SLC4A8Q2Y0W8 1093 aa7.2□□□□□ -1.26
SSBP1-213ENST00000496622 C1QTNF12Q5T7M4 302 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms