RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 LAMB1P07942 1786 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 SYCE3A1L190 88 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 XRCC6P12956 609 aaKnown RBP eCLIP15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 RASA1P20936 1047 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 NT5C2P49902 561 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 KRT40Q6A162 431 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 CCDC125Q86Z20 511 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 PGBD1Q96JS3 809 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 USP28Q96RU2 1077 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 DDX4Q9NQI0 724 aaKnown RBP15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 CFAP45Q9UL16 551 aa15.91■□□□□ 0.14
SPTBN1-205ENST00000496323 FKBP1AP62942 108 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 C16orf86Q6ZW13 317 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 TEKT1Q969V4 418 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 USP17L3A6NCW0 530 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 USP17L4A6NCW7 530 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 DDAH1O94760 285 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 CDK8P49336 464 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 USP17L1Q7RTZ2 530 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 KIAA0825Q8IV33 1275 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 ANKS1AQ92625 1134 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 GRPEL1Q9HAV7 217 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 USP40Q9NVE5 1235 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 RCOR1Q9UKL0 485 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 PCDHAC2Q9Y5I4 1007 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 TCHHQ07283 1943 aa15.9■□□□□ 0.14
SPTBN1-205ENST00000496323 YDJCA8MPS7 323 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 PLEKHA8P1O95397 391 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 CRKP46108 304 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 PICALMQ13492 652 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 ATL3Q6DD88 541 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 DGKHQ86XP1 1220 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 SUPT20HQ8NEM7 779 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 TCP11L1Q9NUJ3 509 aa15.89■□□□□ 0.13
SPTBN1-205ENST00000496323 CALM1P0DP23 149 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 CALM2P0DP24 149 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 CALM3P0DP25 149 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 TRIM22Q8IYM9 498 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 ZNF444Q8N0Y2 327 aaPredicted RBP15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 ZDHHC15Q96MV8 337 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 ZNF396Q96N95 335 aaPredicted RBP15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 MRIQ9BWK5 157 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 TAOK2Q9UL54 1235 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 DDX60LQ5H9U9 1706 aaKnown RBP15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 DEXIO95424 95 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 TSPY3P0CV98 308 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 TSPY8P0CW00 308 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 MRE11P49959 708 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 CCDC93Q567U6 631 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 BRAPQ7Z569 592 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 WASF1Q92558 559 aa15.88■□□□□ 0.13
SPTBN1-205ENST00000496323 LIG1P18858 919 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 CCDC183Q5T5S1 534 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 LRSAM1Q6UWE0 723 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 TMTC3Q6ZXV5 915 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 RBM28Q9NW13 759 aaKnown RBP15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 GABPAQ06546 454 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 NFIAQ12857 509 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 PKN1Q16512 942 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 RTKN2Q8IZC4 609 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 SHISA4Q96DD7 197 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 PSMD1Q99460 953 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 ZNF287Q9HBT7 754 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 RTEL1Q9NZ71 1219 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 NAV1Q8NEY1 1877 aa15.87■□□□□ 0.13
SPTBN1-205ENST00000496323 U2AF2P26368 475 aaKnown RBP eCLIP15.86■□□□□ 0.132e-21■■□□□ 14.3
SPTBN1-205ENST00000496323 GRIPAP1Q4V328 841 aa15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 CLIC4Q9Y696 253 aa15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 PRPF3O43395 683 aaKnown RBP15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 PANK2Q9BZ23 570 aa15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 OSBPL5Q9H0X9 879 aaPredicted RBP15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 KAT14Q9H8E8 782 aa15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 KCNJ14Q9UNX9 436 aa15.86■□□□□ 0.13
SPTBN1-205ENST00000496323 hCG_1642624A0A1W2PR95 340 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 TRIM29Q14134 588 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 ZFPM1Q8IX07 1006 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 PNMA1Q8ND90 353 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 NEDD1Q8NHV4 660 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 V9GY48 417 aaPredicted RBP15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 SCN9AQ15858 1988 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
SPTBN1-205ENST00000496323 GOLGA6L4A6NEF3 574 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 MMP1P03956 469 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 CCDC178Q5BJE1 867 aa15.84■□□□□ 0.13
SPTBN1-205ENST00000496323 LINC00301Q8NCQ3 95 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms