RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 USP48Q86UV5 1035 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 NUP133Q8WUM0 1156 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 PHKBQ93100 1093 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 GZF1Q9H116 711 aaPredicted RBP19.11■□□□□ 0.65
HLA-A-208ENST00000496081 PCDHAC2Q9Y5I4 1007 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 IFNAR1P17181 557 aa19.1■□□□□ 0.65
HLA-A-208ENST00000496081 RASA1P20936 1047 aa19.1■□□□□ 0.65
HLA-A-208ENST00000496081 CDK8P49336 464 aa19.1■□□□□ 0.65
HLA-A-208ENST00000496081 ZSCAN16Q9H4T2 348 aaPredicted RBP19.1■□□□□ 0.65
HLA-A-208ENST00000496081 ZNF287Q9HBT7 754 aa19.1■□□□□ 0.65
HLA-A-208ENST00000496081 SERPINA10Q9UK55 444 aa19.1■□□□□ 0.65
HLA-A-208ENST00000496081 NCLP19338 710 aaKnown RBP19.09■□□□□ 0.65
HLA-A-208ENST00000496081 IARSP41252 1262 aaKnown RBP19.09■□□□□ 0.65
HLA-A-208ENST00000496081 GUCY1B3Q02153 619 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 RCSD1Q6JBY9 416 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 CATIPQ7Z7H3 387 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 ZNF444Q8N0Y2 327 aaPredicted RBP19.09■□□□□ 0.65
HLA-A-208ENST00000496081 GPT2Q8TD30 523 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 C8orf76Q96K31 380 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 IL17RBQ9NRM6 502 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 CD2APQ9Y5K6 639 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 CCDC196A0A1B0GTZ2 297 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 TROAPQ12815 778 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
HLA-A-208ENST00000496081 FIBPO43427 364 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 TSPY3P0CV98 308 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 TSPY8P0CW00 308 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 RBM5P52756 815 aaKnown RBP eCLIP19.08■□□□□ 0.64
HLA-A-208ENST00000496081 TTC6Q86TZ1 520 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 FBXO18Q8NFZ0 1043 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 FHDC1Q9C0D6 1143 aaPredicted RBP19.08■□□□□ 0.64
HLA-A-208ENST00000496081 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.64
HLA-A-208ENST00000496081 TCP11L1Q9NUJ3 509 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 STK36Q9NRP7 1315 aa19.08■□□□□ 0.64
HLA-A-208ENST00000496081 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 GADD45BO75293 160 aaPredicted RBP19.07■□□□□ 0.64
HLA-A-208ENST00000496081 RAD17O75943 681 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 DDAH1O94760 285 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 FMNL1O95466 1100 aaPredicted RBP19.07■□□□□ 0.64
HLA-A-208ENST00000496081 SSRP1Q08945 709 aaKnown RBP19.07■□□□□ 0.64
HLA-A-208ENST00000496081 NFIAQ12857 509 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 OTUD7BQ6GQQ9 843 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 RSBN1LQ6PCB5 846 aaPredicted RBP19.07■□□□□ 0.64
HLA-A-208ENST00000496081 NBPF11Q86T75 865 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 DGKHQ86XP1 1220 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 ANKS1AQ92625 1134 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 AIFM3Q96NN9 605 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 ALG1Q9BT22 464 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 SLC26A6Q9BXS9 759 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 GJB4Q9NTQ9 266 aa19.07■□□□□ 0.64
HLA-A-208ENST00000496081 PSMD14O00487 310 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 VIL1P09327 827 aaKnown RBP19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CALM1P0DP23 149 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CALM2P0DP24 149 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CALM3P0DP25 149 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 KRT85P78386 507 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 GABPAQ06546 454 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CRACR2BQ8N4Y2 399 aaPredicted RBP19.06■□□□□ 0.64
HLA-A-208ENST00000496081 RGS22Q8NE09 1264 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 NLGN2Q8NFZ4 835 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 MYO3BQ8WXR4 1341 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 UBE2Q2LH0YL09 131 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CCDC178Q5BJE1 867 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CMTR1Q8N1G2 835 aaKnown RBP19.06■□□□□ 0.64
HLA-A-208ENST00000496081 ZNRF3Q9ULT6 936 aa19.06■□□□□ 0.64
HLA-A-208ENST00000496081 CACNB3P54284 484 aa19.05■□□□□ 0.64
HLA-A-208ENST00000496081 NIM1KQ8IY84 436 aa19.05■□□□□ 0.64
HLA-A-208ENST00000496081 CCDC82Q8N4S0 544 aa19.05■□□□□ 0.64
HLA-A-208ENST00000496081 GMLQ99445 158 aa19.05■□□□□ 0.64
HLA-A-208ENST00000496081 IDI2Q9BXS1 227 aa19.05■□□□□ 0.64
HLA-A-208ENST00000496081 MYH15Q9Y2K3 1946 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 MBD3O95983 291 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 CSPP1Q1MSJ5 1256 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 CFAP100Q494V2 611 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 ZFPM1Q8IX07 1006 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 TRIM22Q8IYM9 498 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 NEDD1Q8NHV4 660 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 TAOK3Q9H2K8 898 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
HLA-A-208ENST00000496081 TFIP11Q9UBB9 837 aaKnown RBP19.04■□□□□ 0.64
HLA-A-208ENST00000496081 NFKBIEO00221 500 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 GUCY1A2P33402 732 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 FUT2Q10981 343 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 FAM198AQ9UFP1 575 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 SERPINB13Q9UIV8 391 aa19.04■□□□□ 0.64
HLA-A-208ENST00000496081 KRT40Q6A162 431 aa19.03■□□□□ 0.64
HLA-A-208ENST00000496081 WASF1Q92558 559 aa19.03■□□□□ 0.64
HLA-A-208ENST00000496081 PRMT6Q96LA8 375 aaPredicted RBP19.03■□□□□ 0.64
HLA-A-208ENST00000496081 SYT17Q9BSW7 474 aa19.03■□□□□ 0.64
HLA-A-208ENST00000496081 TDRD3Q9H7E2 651 aaKnown RBP19.03■□□□□ 0.64
HLA-A-208ENST00000496081 BCS1LQ9Y276 419 aa19.03■□□□□ 0.64
HLA-A-208ENST00000496081 NPM3O75607 178 aaKnown RBP19.02■□□□□ 0.64
HLA-A-208ENST00000496081 PLEKHA8P1O95397 391 aa19.02■□□□□ 0.64
HLA-A-208ENST00000496081 DEXIO95424 95 aa19.02■□□□□ 0.64
HLA-A-208ENST00000496081 UBE2HP62256 183 aa19.02■□□□□ 0.64
HLA-A-208ENST00000496081 CAVIN1Q6NZI2 390 aaKnown RBP19.02■□□□□ 0.64
HLA-A-208ENST00000496081 PNMA1Q8ND90 353 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms