RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 C9orf172C9J069 976 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 UPK3BL2E5RIL1 263 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 TNFRSF10CO14798 259 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 SART1O43290 800 aaKnown RBP8.07□□□□□ -1.12
SSR3-208ENST00000496050 TIAF1O95411 115 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 SPATA31C1P0DKV0 1188 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 CCNFP41002 786 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 NRG1Q02297 640 aaPredicted RBP8.07□□□□□ -1.12
SSR3-208ENST00000496050 UNC5AQ6ZN44 842 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 MRPL41Q8IXM3 137 aaKnown RBP8.07□□□□□ -1.12
SSR3-208ENST00000496050 SLFN12Q8IYM2 578 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 NACC1Q96RE7 527 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 CEP41Q9BYV8 373 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 GSX1Q9H4S2 264 aaPredicted RBP8.07□□□□□ -1.12
SSR3-208ENST00000496050 AKTIPQ9H8T0 292 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 SNTG2Q9NY99 539 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 USP21Q9UK80 565 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 PCOLCE2Q9UKZ9 415 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 APBA3O96018 575 aa8.06□□□□□ -1.12
SSR3-208ENST00000496050 HCLS1P14317 486 aaPredicted RBP8.06□□□□□ -1.12
SSR3-208ENST00000496050 USP11P51784 963 aa8.06□□□□□ -1.12
SSR3-208ENST00000496050 IFRD2Q12894 506 aaPredicted RBP8.06□□□□□ -1.12
SSR3-208ENST00000496050 SHISA2Q6UWI4 295 aa8.06□□□□□ -1.12
SSR3-208ENST00000496050 SMYD4Q8IYR2 804 aaPredicted RBP8.06□□□□□ -1.12
SSR3-208ENST00000496050 SCARF2Q96GP6 870 aaPredicted RBP8.06□□□□□ -1.12
SSR3-208ENST00000496050 DHRS1Q96LJ7 313 aa8.06□□□□□ -1.12
SSR3-208ENST00000496050 SLC9A7Q96T83 725 aa8.06□□□□□ -1.12
SSR3-208ENST00000496050 MSRB2Q9Y3D2 182 aa8.06□□□□□ -1.12
SSR3-208ENST00000496050 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.05□□□□□ -1.12
SSR3-208ENST00000496050 PDPK1O15530 556 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 DNAJA2O60884 412 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 GBP1P32455 592 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 NTF4P34130 210 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 CAP2P40123 477 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 NCAPHQ15003 741 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 SDE2Q6IQ49 451 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.05□□□□□ -1.12
SSR3-208ENST00000496050 PHACTR4Q8IZ21 702 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 AGGF1Q8N302 714 aaeCLIP8.05□□□□□ -1.12
SSR3-208ENST00000496050 C2CD4AQ8NCU7 369 aaPredicted RBP8.05□□□□□ -1.12
SSR3-208ENST00000496050 ISL2Q96A47 359 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 CCDC74BQ96LY2 380 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 PHAXQ9H814 394 aaKnown RBP8.05□□□□□ -1.12
SSR3-208ENST00000496050 TBX22Q9Y458 520 aa8.05□□□□□ -1.12
SSR3-208ENST00000496050 FAM221BA6H8Z2 402 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 RGS13O14921 159 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 CLSTN1O94985 981 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 ALX3O95076 343 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 ACRP10323 421 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 RASGRF1Q13972 1273 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 RASA3Q14644 834 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 FAM178BQ8IXR5 827 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 MICAL1Q8TDZ2 1067 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 FBRSQ9HAH7 460 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 MAPK8IP1Q9UQF2 711 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 ACTL7BQ9Y614 415 aa8.04□□□□□ -1.12
SSR3-208ENST00000496050 GAS2O43903 313 aaKnown RBP8.03□□□□□ -1.12
SSR3-208ENST00000496050 GJB6O95452 261 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 CST3P01034 146 aaPredicted RBP8.03□□□□□ -1.12
SSR3-208ENST00000496050 NEFMP07197 916 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 GLB1P16278 677 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 SLBPQ14493 270 aaKnown RBP eCLIP8.03□□□□□ -1.12
SSR3-208ENST00000496050 BBS9Q3SYG4 887 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 KIF2CQ99661 725 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 YIPF2Q9BWQ6 316 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 FOXQ1Q9C009 403 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 FAM105AQ9NUU6 356 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 LTBP3Q9NS15 1303 aa8.03□□□□□ -1.12
SSR3-208ENST00000496050 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
SSR3-208ENST00000496050 INSM1Q01101 510 aaPredicted RBP8.02□□□□□ -1.13
SSR3-208ENST00000496050 ZYXQ15942 572 aaKnown RBP8.02□□□□□ -1.13
SSR3-208ENST00000496050 NKG7Q16617 165 aa8.02□□□□□ -1.13
SSR3-208ENST00000496050 C6orf15Q6UXA7 325 aaPredicted RBP8.02□□□□□ -1.13
SSR3-208ENST00000496050 MFSD2AQ8NA29 543 aa8.02□□□□□ -1.13
SSR3-208ENST00000496050 DNAJC7Q99615 494 aa8.02□□□□□ -1.13
SSR3-208ENST00000496050 LRIG2O94898 1065 aa8.01□□□□□ -1.13
SSR3-208ENST00000496050 IREB2P48200 963 aaKnown RBP8.01□□□□□ -1.13
SSR3-208ENST00000496050 SLC7A5Q01650 507 aa8.01□□□□□ -1.13
SSR3-208ENST00000496050 GNPTABQ3T906 1256 aa8.01□□□□□ -1.13
SSR3-208ENST00000496050 EEPD1Q7L9B9 569 aa8.01□□□□□ -1.13
SSR3-208ENST00000496050 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
SSR3-208ENST00000496050 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.01□□□□□ -1.13
SSR3-208ENST00000496050 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
SSR3-208ENST00000496050 FAM86C2PA6NEL3 165 aa8□□□□□ -1.13
SSR3-208ENST00000496050 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
SSR3-208ENST00000496050 PREPP48147 710 aa8□□□□□ -1.13
SSR3-208ENST00000496050 MTERF2Q49AM1 385 aa8□□□□□ -1.13
SSR3-208ENST00000496050 PRAMEF13Q5VWM6 474 aa8□□□□□ -1.13
SSR3-208ENST00000496050 KIAA1211LQ6NV74 962 aa8□□□□□ -1.13
SSR3-208ENST00000496050 Q6ZS46 218 aa8□□□□□ -1.13
SSR3-208ENST00000496050 JAZF1Q86VZ6 243 aa8□□□□□ -1.13
SSR3-208ENST00000496050 ST13P5Q8NFI4 369 aaPredicted RBP8□□□□□ -1.13
SSR3-208ENST00000496050 CYB5D2Q8WUJ1 264 aa8□□□□□ -1.13
SSR3-208ENST00000496050 ZNF669Q96BR6 464 aaPredicted RBP8□□□□□ -1.13
SSR3-208ENST00000496050 ACSS3Q9H6R3 686 aa8□□□□□ -1.13
SSR3-208ENST00000496050 MRPL42Q9Y6G3 142 aaKnown RBP8□□□□□ -1.13
SSR3-208ENST00000496050 HSD3B2P26439 372 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms