RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 CAVIN4Q5BKX8 364 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 APBA2Q99767 749 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 PTPRFP10586 1907 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 AAK1Q2M2I8 961 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 LPAR1Q92633 364 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZNF594Q96JF6 807 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 EPHX3Q9H6B9 360 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 MORF4L1Q9UBU8 362 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 DDX20Q9UHI6 824 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
SMARCAL1-213ENST00000496037 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 CTNND1O60716 968 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 IGFBP4P22692 258 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 CNGA1P29973 690 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 MRE11P49959 708 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 TRIM60Q495X7 471 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 ASCC2Q9H1I8 757 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 ATRNL1Q5VV63 1379 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 FRMPD3Q5JV73 1810 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
SMARCAL1-213ENST00000496037 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 MAPK4P31152 587 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZEB1P37275 1124 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 CCL14Q16627 93 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 GPRC5AQ8NFJ5 357 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 DAGLAQ9Y4D2 1042 aa12.12□□□□□ -0.47
SMARCAL1-213ENST00000496037 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 MUC6Q6W4X9 2439 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 HMGCS2P54868 508 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 GNAI1P63096 354 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 FOXO4P98177 505 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
SMARCAL1-213ENST00000496037 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 BMP1P13497 986 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 SPP2Q13103 211 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 C1orf115Q9H7X2 142 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 UTYO14607 1347 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 MROH5Q6ZUA9 1318 aa12.1□□□□□ -0.47
SMARCAL1-213ENST00000496037 FAM86C2PA6NEL3 165 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 GPR37L1O60883 481 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZNF853P0CG23 659 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 RGS3P49796 1198 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 EPHB4P54760 987 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 FPGSQ05932 587 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 SNX17Q15036 470 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 GJC2Q5T442 439 aaPredicted RBP12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 USP6NLQ92738 828 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 ZSWIM6Q9HCJ5 1215 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
SMARCAL1-213ENST00000496037 CACNA1AO00555 2505 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 ENTPD3O75355 529 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 CLTBP09497 229 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 RAG1P15918 1043 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 ADGRE1Q14246 886 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 MORN1Q5T089 497 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms