RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 ECE1P42892 770 aa17.51■□□□□ 0.39
HDAC9-226ENST00000496026 ABCB5Q2M3G0 1257 aa17.51■□□□□ 0.39
HDAC9-226ENST00000496026 ERO1BQ86YB8 467 aa17.51■□□□□ 0.39
HDAC9-226ENST00000496026 ZNF444Q8N0Y2 327 aaPredicted RBP17.51■□□□□ 0.39
HDAC9-226ENST00000496026 CCDC17Q96LX7 622 aa17.51■□□□□ 0.39
HDAC9-226ENST00000496026 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
HDAC9-226ENST00000496026 GH2P01242 217 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 SLC10A3P09131 477 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 MKRN3Q13064 507 aaKnown RBP17.5■□□□□ 0.39
HDAC9-226ENST00000496026 RASAL3Q86YV0 1011 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 OPTNQ96CV9 577 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 OTUD5Q96G74 571 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 CAPNS2Q96L46 248 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
HDAC9-226ENST00000496026 GINM1Q9NU53 330 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 ZBTB21Q9ULJ3 1066 aa17.5■□□□□ 0.39
HDAC9-226ENST00000496026 SPDYE5A6NIY4 337 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 AKR1B1P15121 316 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 PTPRAP18433 802 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 RASA1P20936 1047 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
HDAC9-226ENST00000496026 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
HDAC9-226ENST00000496026 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 MFSD6Q6ZSS7 791 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
HDAC9-226ENST00000496026 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
HDAC9-226ENST00000496026 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
HDAC9-226ENST00000496026 PCP11498 1178 aaKnown RBP17.48■□□□□ 0.39
HDAC9-226ENST00000496026 JAG1P78504 1218 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 PPATQ06203 517 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 SPRYD7Q5W111 196 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 TMEM179Q6ZVK1 233 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 TBC1D10CQ8IV04 446 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 ZHX2Q9Y6X8 837 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 LAMB1P07942 1786 aa17.48■□□□□ 0.39
HDAC9-226ENST00000496026 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
HDAC9-226ENST00000496026 FAM155AB1AL88 458 aaPredicted RBP17.47■□□□□ 0.39
HDAC9-226ENST00000496026 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
HDAC9-226ENST00000496026 CYP21A2P08686 494 aa17.47■□□□□ 0.39
HDAC9-226ENST00000496026 ZBTB48P10074 688 aaPredicted RBP17.47■□□□□ 0.39
HDAC9-226ENST00000496026 VEGFBP49765 207 aa17.47■□□□□ 0.39
HDAC9-226ENST00000496026 PPIL2Q13356 520 aa17.47■□□□□ 0.39
HDAC9-226ENST00000496026 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
HDAC9-226ENST00000496026 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
HDAC9-226ENST00000496026 NBPF3Q9H094 633 aa17.47■□□□□ 0.39
HDAC9-226ENST00000496026 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
HDAC9-226ENST00000496026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC9-226ENST00000496026 TSPY2A6NKD2 308 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 ORC4O43929 436 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 TSPY3P0CV98 308 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 TSPY8P0CW00 308 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 GJA5P36382 358 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 TFAP4Q01664 338 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 NOGQ13253 232 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 SEPT2Q15019 361 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 NECTIN1Q15223 517 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 TACC3Q9Y6A5 838 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 OTOFQ9HC10 1997 aa17.46■□□□□ 0.39
HDAC9-226ENST00000496026 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 IRF6O14896 467 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 SLC27A2O14975 620 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 AOC2O75106 756 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 FGRP09769 529 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 TRDNQ13061 729 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 ESR2Q92731 530 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 KRT23Q9C075 422 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 NEDD4P46934 1319 aa17.45■□□□□ 0.38
HDAC9-226ENST00000496026 GUCY1A2P33402 732 aa17.44■□□□□ 0.38
HDAC9-226ENST00000496026 GTF2A2P52657 109 aa17.44■□□□□ 0.38
HDAC9-226ENST00000496026 ICA1Q05084 483 aa17.44■□□□□ 0.38
HDAC9-226ENST00000496026 C8orf34Q49A92 452 aa17.44■□□□□ 0.38
HDAC9-226ENST00000496026 ZNF280CQ8ND82 737 aa17.44■□□□□ 0.38
HDAC9-226ENST00000496026 AFG3L2Q9Y4W6 797 aa17.44■□□□□ 0.38
HDAC9-226ENST00000496026 B4E1Z4 1266 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 E7EWF7 191 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 CXCL11O14625 94 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 EPB41L2O43491 1005 aaKnown RBP17.43■□□□□ 0.38
HDAC9-226ENST00000496026 ZKSCAN1P17029 563 aaPredicted RBP17.43■□□□□ 0.38
HDAC9-226ENST00000496026 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
HDAC9-226ENST00000496026 SPP2Q13103 211 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
HDAC9-226ENST00000496026 NEDD1Q8NHV4 660 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 WDR18Q9BV38 432 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 KANSL2Q9H9L4 492 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 TAF6LQ9Y6J9 622 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 DOCK1Q14185 1865 aa17.43■□□□□ 0.38
HDAC9-226ENST00000496026 MANSC4A6NHS7 340 aaPredicted RBP17.42■□□□□ 0.38
HDAC9-226ENST00000496026 MCCP23508 829 aa17.42■□□□□ 0.38
HDAC9-226ENST00000496026 MAP2K2P36507 400 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms