RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 LOC285556D6RIA3 1793 aa22.42■■□□□ 1.18
CLCNKA-207ENST00000495784 MYO5AQ9Y4I1 1855 aaKnown RBP22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 APBB1O00213 710 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 ELNP15502 786 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 GJA8P48165 433 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 IRX3P78415 501 aaPredicted RBP22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 JAG1P78504 1218 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 IRF5Q13568 498 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 CLASRPQ8N2M8 674 aaKnown RBP22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 PXYLP1Q8TE99 480 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 ZBTB21Q9ULJ3 1066 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 DDX19BQ9UMR2 479 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 COG6Q9Y2V7 657 aa22.41■■□□□ 1.18
CLCNKA-207ENST00000495784 C19orf81C9J6K1 198 aa22.4■■□□□ 1.18
CLCNKA-207ENST00000495784 RPAP2Q8IXW5 612 aaPredicted RBP22.4■■□□□ 1.18
CLCNKA-207ENST00000495784 UNC93B1Q9H1C4 597 aa22.4■■□□□ 1.18
CLCNKA-207ENST00000495784 FOCADQ5VW36 1801 aa22.4■■□□□ 1.18
CLCNKA-207ENST00000495784 CDK5RAP2Q96SN8 1893 aa22.39■■□□□ 1.18
CLCNKA-207ENST00000495784 USP17L10C9JJH3 530 aa22.39■■□□□ 1.17
CLCNKA-207ENST00000495784 INHAP05111 366 aa22.39■■□□□ 1.17
CLCNKA-207ENST00000495784 TTF1Q15361 905 aaPredicted RBP22.39■■□□□ 1.17
CLCNKA-207ENST00000495784 SHROOM1Q2M3G4 852 aaPredicted RBP22.39■■□□□ 1.17
CLCNKA-207ENST00000495784 KIF1BPQ96EK5 621 aa22.39■■□□□ 1.17
CLCNKA-207ENST00000495784 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
CLCNKA-207ENST00000495784 IFIT2P09913 472 aaKnown RBP22.38■■□□□ 1.17
CLCNKA-207ENST00000495784 CHMP4BQ9H444 224 aaKnown RBP22.38■■□□□ 1.17
CLCNKA-207ENST00000495784 ZBTB40Q9NUA8 1239 aa22.38■■□□□ 1.17
CLCNKA-207ENST00000495784 SERPINB13Q9UIV8 391 aa22.38■■□□□ 1.17
CLCNKA-207ENST00000495784 GH2P01242 217 aa22.37■■□□□ 1.17
CLCNKA-207ENST00000495784 HOXA7P31268 230 aaPredicted RBP22.37■■□□□ 1.17
CLCNKA-207ENST00000495784 HABP4Q5JVS0 413 aaKnown RBP22.37■■□□□ 1.17
CLCNKA-207ENST00000495784 TTC6Q86TZ1 520 aa22.37■■□□□ 1.17
CLCNKA-207ENST00000495784 U2AF1L4Q8WU68 220 aaKnown RBP22.37■■□□□ 1.17
CLCNKA-207ENST00000495784 DPF3Q92784 378 aa22.36■■□□□ 1.17
CLCNKA-207ENST00000495784 EHD4Q9H223 541 aa22.36■■□□□ 1.17
CLCNKA-207ENST00000495784 MORF4L1Q9UBU8 362 aa22.36■■□□□ 1.17
CLCNKA-207ENST00000495784 RCAN3Q9UKA8 241 aa22.36■■□□□ 1.17
CLCNKA-207ENST00000495784 MAGEB6P1A0A0J9YX57 407 aa22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 SLC9C2Q5TAH2 1124 aa22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 TATDN1Q6P1N9 297 aa22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 SIRT2Q8IXJ6 389 aa22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 DNAJC2Q99543 621 aaKnown RBP22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 P2RX7Q99572 595 aaKnown RBP22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 FEZ1Q99689 392 aa22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 RIOK1Q9BRS2 568 aaKnown RBP22.35■■□□□ 1.17
CLCNKA-207ENST00000495784 H0YGN5 161 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 GOLIM4O00461 696 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 RAB11FIP3O75154 756 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 FARP2O94887 1054 aaPredicted RBP22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 SGPL1O95470 568 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 PDE6AP16499 860 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 HERVK_113P62684 666 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 USP17L2Q6R6M4 530 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 GPRC5AQ8NFJ5 357 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 DEFB118Q96PH6 123 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 HTATIP2Q9BUP3 242 aa22.34■■□□□ 1.17
CLCNKA-207ENST00000495784 POLR3DP05423 398 aaPredicted RBP22.33■■□□□ 1.17
CLCNKA-207ENST00000495784 CERKLQ49MI3 558 aaPredicted RBP22.33■■□□□ 1.17
CLCNKA-207ENST00000495784 UBE2Q1Q7Z7E8 422 aa22.33■■□□□ 1.17
CLCNKA-207ENST00000495784 CRNKL1Q9BZJ0 848 aaKnown RBP22.33■■□□□ 1.17
CLCNKA-207ENST00000495784 EMILIN3Q9NT22 766 aa22.33■■□□□ 1.17
CLCNKA-207ENST00000495784 PCDH10Q9P2E7 1040 aa22.33■■□□□ 1.17
CLCNKA-207ENST00000495784 MYH1P12882 1939 aa22.33■■□□□ 1.16
CLCNKA-207ENST00000495784 TFRCP02786 760 aaKnown RBP22.32■■□□□ 1.16
CLCNKA-207ENST00000495784 RAB3GAP1Q15042 981 aa22.32■■□□□ 1.16
CLCNKA-207ENST00000495784 ABCB5Q2M3G0 1257 aa22.32■■□□□ 1.16
CLCNKA-207ENST00000495784 GJD2Q9UKL4 321 aa22.32■■□□□ 1.16
CLCNKA-207ENST00000495784 ZNF532Q9HCE3 1301 aa22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 HMGCRP04035 888 aa22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 CAPN2P17655 700 aa22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 PLCD1P51178 756 aa22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 ZYXQ15942 572 aaKnown RBP22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 CCAR1Q8IX12 1150 aaKnown RBP22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 GTF3C2Q8WUA4 911 aaPredicted RBP22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 TXNRD2Q9NNW7 524 aa22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 CABP5Q9NP86 173 aa22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 PAK6Q9NQU5 681 aaPredicted RBP22.31■■□□□ 1.16
CLCNKA-207ENST00000495784 PEX10O60683 326 aa22.3■■□□□ 1.16
CLCNKA-207ENST00000495784 PAGR1Q9BTK6 254 aa22.3■■□□□ 1.16
CLCNKA-207ENST00000495784 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.3■■□□□ 1.16
CLCNKA-207ENST00000495784 MCM9Q9NXL9 1143 aa22.3■■□□□ 1.16
CLCNKA-207ENST00000495784 COLQQ9Y215 455 aaPredicted RBP22.3■■□□□ 1.16
CLCNKA-207ENST00000495784 DOCK3Q8IZD9 2030 aa22.3■■□□□ 1.16
CLCNKA-207ENST00000495784 SHMT1P34896 483 aa22.29■■□□□ 1.16
CLCNKA-207ENST00000495784 USP14P54578 494 aa22.29■■□□□ 1.16
CLCNKA-207ENST00000495784 SOCS4Q8WXH5 440 aa22.29■■□□□ 1.16
CLCNKA-207ENST00000495784 EDC3Q96F86 508 aaKnown RBP22.29■■□□□ 1.16
CLCNKA-207ENST00000495784 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
CLCNKA-207ENST00000495784 RBPJLQ9UBG7 517 aa22.29■■□□□ 1.16
CLCNKA-207ENST00000495784 TCRBV5S4A2TA0A5A2 114 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L15C9J2P7 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L13C9JLJ4 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L11C9JVI0 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L18D6R9N7 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L22D6RA61 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L17D6RBQ6 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L19D6RCP7 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L20D6RJB6 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 CYP2B6P20813 491 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms