RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ZMYND8Q9ULU4 1186 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-209ENST00000495630 PNMA6EA0A0J9YXQ4 647 aa21.55■■□□□ 1.04
TMEM53-209ENST00000495630 HERVK_113P62684 666 aa21.55■■□□□ 1.04
TMEM53-209ENST00000495630 JAG1P78504 1218 aa21.55■■□□□ 1.04
TMEM53-209ENST00000495630 TXNRD2Q9NNW7 524 aa21.55■■□□□ 1.04
TMEM53-209ENST00000495630 PRKAR2AP13861 404 aaKnown RBP21.54■■□□□ 1.04
TMEM53-209ENST00000495630 CCDC158Q5M9N0 1113 aa21.54■■□□□ 1.04
TMEM53-209ENST00000495630 MAPKAPK5Q8IW41 473 aa21.54■■□□□ 1.04
TMEM53-209ENST00000495630 CRACR2BQ8N4Y2 399 aaPredicted RBP21.54■■□□□ 1.04
TMEM53-209ENST00000495630 GTF3C2Q8WUA4 911 aaPredicted RBP21.54■■□□□ 1.04
TMEM53-209ENST00000495630 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
TMEM53-209ENST00000495630 PDE3AQ14432 1141 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 Q3C1V9 767 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 LRIT3Q3SXY7 679 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 TTC39AQ5SRH9 613 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 CCAR1Q8IX12 1150 aaKnown RBP21.53■■□□□ 1.04
TMEM53-209ENST00000495630 USP6NLQ92738 828 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 DNAJC18Q9H819 358 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 SNRKQ9NRH2 765 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 PALD1Q9ULE6 856 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 LAMA3Q16787 3333 aa21.53■■□□□ 1.04
TMEM53-209ENST00000495630 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
TMEM53-209ENST00000495630 ZNF512BQ96KM6 892 aaPredicted RBP21.52■■□□□ 1.04
TMEM53-209ENST00000495630 FLT1P17948 1338 aa21.52■■□□□ 1.03
TMEM53-209ENST00000495630 PEX10O60683 326 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 CYP2E1P05181 493 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-209ENST00000495630 TRIM27P14373 513 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-209ENST00000495630 SYN1P17600 705 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 MAGEA10P43363 369 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-209ENST00000495630 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 ERVK-24P63145 666 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 CACNB2Q08289 660 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-209ENST00000495630 TNNI3KQ59H18 835 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 EMILIN3Q9NT22 766 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 ZBTB21Q9ULJ3 1066 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 FPGT-TNNI3KV9GXZ4 949 aa21.51■■□□□ 1.03
TMEM53-209ENST00000495630 HLA-DOAP06340 250 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 COL6A1P12109 1028 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 RGS2P41220 211 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 MORN1Q5T089 497 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L2Q6R6M4 530 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 PLEKHH3Q7Z736 793 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 ADGRA1Q86SQ6 560 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 TDHQ8IZJ6 230 aa21.5■■□□□ 1.03
TMEM53-209ENST00000495630 GDF11O95390 407 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 POLA2Q14181 598 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 LHX8Q68G74 356 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 GPR142Q7Z601 462 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 DEFB123Q8N688 67 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 DBNDD2Q9BQY9 259 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 UBE2OQ9C0C9 1292 aaKnown RBP21.49■■□□□ 1.03
TMEM53-209ENST00000495630 PORCNQ9H237 461 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 COL6A3P12111 3177 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 PFASO15067 1338 aa21.49■■□□□ 1.03
TMEM53-209ENST00000495630 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
TMEM53-209ENST00000495630 POTEEQ6S8J3 1075 aa21.48■■□□□ 1.03
TMEM53-209ENST00000495630 SAP30BPQ9UHR5 308 aaKnown RBP21.48■■□□□ 1.03
TMEM53-209ENST00000495630 RABGAP1Q9Y3P9 1069 aa21.48■■□□□ 1.03
TMEM53-209ENST00000495630 A0A0C4DFX4 3053 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 GLRX3O76003 335 aaKnown RBP21.47■■□□□ 1.03
TMEM53-209ENST00000495630 ZAP70P43403 619 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 ATP8B2P98198 1209 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 TATDN1Q6P1N9 297 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 CERS3Q8IU89 383 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
TMEM53-209ENST00000495630 APBA2Q99767 749 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 PAGR1Q9BTK6 254 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 ALPK3Q96L96 1907 aa21.47■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L15C9J2P7 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L13C9JLJ4 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L11C9JVI0 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L18D6R9N7 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L22D6RA61 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L17D6RBQ6 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L19D6RCP7 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L20D6RJB6 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 GH2P01242 217 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 CCND3P30281 292 aaPredicted RBP21.46■■□□□ 1.03
TMEM53-209ENST00000495630 CCNA1P78396 465 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 USP17L24Q0WX57 530 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 MAP2K5Q13163 448 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 OS9Q13438 667 aaPredicted RBP21.46■■□□□ 1.03
TMEM53-209ENST00000495630 CCL14Q16627 93 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 SSH3Q8TE77 659 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 CLUAP1Q96AJ1 413 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 EDC3Q96F86 508 aaKnown RBP21.46■■□□□ 1.03
TMEM53-209ENST00000495630 C12orf42Q96LP6 360 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 PIH1D3Q9NQM4 214 aaKnown RBP21.46■■□□□ 1.03
TMEM53-209ENST00000495630 TNNQ9UQP3 1299 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 STXBP5LQ9Y2K9 1186 aa21.46■■□□□ 1.03
TMEM53-209ENST00000495630 PLXNB2O15031 1838 aa21.45■■□□□ 1.03
TMEM53-209ENST00000495630 ATAD5Q96QE3 1844 aa21.45■■□□□ 1.03
TMEM53-209ENST00000495630 SURF6O75683 361 aaKnown RBP21.45■■□□□ 1.02
TMEM53-209ENST00000495630 BCAR3O75815 825 aa21.45■■□□□ 1.02
TMEM53-209ENST00000495630 CYP7A1P22680 504 aa21.45■■□□□ 1.02
TMEM53-209ENST00000495630 DYNLL1P63167 89 aaKnown RBP21.45■■□□□ 1.02
TMEM53-209ENST00000495630 CWC22Q9HCG8 908 aaKnown RBP21.45■■□□□ 1.02
TMEM53-209ENST00000495630 MTMR10Q9NXD2 777 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms