RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
MRPL55-232ENST00000495434 CPA4Q9UI42 421 aa16.92■□□□□ 0.3
MRPL55-232ENST00000495434 PNMA3Q9UL41 463 aa16.92■□□□□ 0.3
MRPL55-232ENST00000495434 ZBTB21Q9ULJ3 1066 aa16.92■□□□□ 0.3
MRPL55-232ENST00000495434 MBD4O95243 580 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 CYP2C8P10632 490 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 PLCD1P51178 756 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 HMGCS2P54868 508 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 BACE1P56817 501 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 JAG1P78504 1218 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 GABPAQ06546 454 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 ARMT1Q9H993 441 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
MRPL55-232ENST00000495434 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
MRPL55-232ENST00000495434 GLRX3O76003 335 aaKnown RBP16.9■□□□□ 0.3
MRPL55-232ENST00000495434 GDF11O95390 407 aa16.9■□□□□ 0.3
MRPL55-232ENST00000495434 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-232ENST00000495434 LRRFIP1Q32MZ4 808 aaKnown RBP16.9■□□□□ 0.3
MRPL55-232ENST00000495434 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
MRPL55-232ENST00000495434 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-232ENST00000495434 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-232ENST00000495434 GH2P01242 217 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 HOXD10P28358 340 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 SHMT1P34896 483 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 MTMR2Q13614 643 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 TREML2Q5T2D2 321 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 ARMC5Q96C12 935 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 ARHGAP39Q9C0H5 1083 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 PUS7LQ9H0K6 701 aaKnown RBP16.89■□□□□ 0.29
MRPL55-232ENST00000495434 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
MRPL55-232ENST00000495434 MX1P20591 662 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 OSBPP22059 807 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 HOXA7P31268 230 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-232ENST00000495434 PSMC4P43686 418 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 ABCB5Q2M3G0 1257 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-232ENST00000495434 CABP5Q9NP86 173 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 SALL3Q9BXA9 1300 aa16.88■□□□□ 0.29
MRPL55-232ENST00000495434 MGAMO43451 1857 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 RNF113AO15541 343 aaKnown RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 PRKAB2O43741 272 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 CHGBP05060 677 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 GCLCP48506 637 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 MLLT1Q03111 559 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 FAM110CQ1W6H9 321 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 SHROOM1Q2M3G4 852 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 USP17L2Q6R6M4 530 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 APPBP2Q92624 585 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 TRIM47Q96LD4 638 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
MRPL55-232ENST00000495434 BAZ2AQ9UIF9 1905 aaKnown RBP16.87■□□□□ 0.29
MRPL55-232ENST00000495434 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-232ENST00000495434 CTGFP29279 349 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 FCGRTP55899 365 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 SOX10P56693 466 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-232ENST00000495434 OSBP2Q969R2 916 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 C12orf42Q96LP6 360 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-232ENST00000495434 STAP2Q9UGK3 403 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 SRRDQ9UH36 339 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 PTCH2Q9Y6C5 1203 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
MRPL55-232ENST00000495434 GNAT2P19087 354 aa16.85■□□□□ 0.29
MRPL55-232ENST00000495434 USP14P54578 494 aa16.85■□□□□ 0.29
MRPL55-232ENST00000495434 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
MRPL55-232ENST00000495434 SLC9C1Q4G0N8 1177 aa16.85■□□□□ 0.29
MRPL55-232ENST00000495434 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
MRPL55-232ENST00000495434 MYH8P13535 1937 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 TNRC18O15417 2968 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-232ENST00000495434 USP17L12C9JPN9 530 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 USP17L21D6R901 530 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 CYP2D6P10635 497 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 GUCY1A2P33402 732 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-232ENST00000495434 SBK1Q52WX2 424 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 CTR9Q6PD62 1173 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 SMC5Q8IY18 1101 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 ANKRD13CQ8N6S4 541 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-232ENST00000495434 ZNF333Q96JL9 665 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 CCDC17Q96LX7 622 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
MRPL55-232ENST00000495434 ARPP21Q9UBL0 812 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-232ENST00000495434 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.28
MRPL55-232ENST00000495434 EVX2Q03828 476 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms