RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 H2AFXP16104 143 aaPredicted RBP17.02■□□□□ 0.32
UBXN11-215ENST00000494942 ZNF18P17022 549 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 XBP1P17861 261 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
UBXN11-215ENST00000494942 IGHMBP2P38935 993 aaKnown RBP17.02■□□□□ 0.32
UBXN11-215ENST00000494942 SUSD4Q5VX71 490 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 REXO1L1PQ8IX06 675 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.32
UBXN11-215ENST00000494942 INTS13Q9NVM9 706 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 NFE2L3Q9Y4A8 694 aa17.02■□□□□ 0.32
UBXN11-215ENST00000494942 PPARAQ07869 468 aa17.02■□□□□ 0.31
UBXN11-215ENST00000494942 ERCC6LQ2NKX8 1250 aa17.02■□□□□ 0.31
UBXN11-215ENST00000494942 PARP10Q53GL7 1025 aa17.02■□□□□ 0.31
UBXN11-215ENST00000494942 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.31
UBXN11-215ENST00000494942 TMEM139Q8IV31 216 aa17.02■□□□□ 0.31
UBXN11-215ENST00000494942 PCDHB6Q9Y5E3 794 aa17.02■□□□□ 0.31
UBXN11-215ENST00000494942 EXOC5O00471 708 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-215ENST00000494942 BCAMP50895 628 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
UBXN11-215ENST00000494942 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 ESR2Q92731 530 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 BAG1Q99933 345 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-215ENST00000494942 ANAPC4Q9UJX5 808 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 SLIT2O94813 1529 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
UBXN11-215ENST00000494942 GRIN1Q05586 938 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 NR5A1Q13285 461 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 NUP133Q8WUM0 1156 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-215ENST00000494942 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 PPP2R2CQ9Y2T4 447 aa17.01■□□□□ 0.31
UBXN11-215ENST00000494942 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
UBXN11-215ENST00000494942 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
UBXN11-215ENST00000494942 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
UBXN11-215ENST00000494942 SNAP23O00161 211 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 TPM1P09493 284 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 PLCD1P51178 756 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 FMR1Q06787 632 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBXN11-215ENST00000494942 BMS1Q14692 1282 aaKnown RBP16.99■□□□□ 0.31
UBXN11-215ENST00000494942 UBXN4Q92575 508 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 CABP5Q9NP86 173 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 ZHX1Q9UKY1 873 aaPredicted RBP16.99■□□□□ 0.31
UBXN11-215ENST00000494942 BMP15O95972 392 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 SEC23AQ15436 765 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 MNS1Q8NEH6 495 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
UBXN11-215ENST00000494942 ARGLU1Q9NWB6 273 aaPredicted RBP16.99■□□□□ 0.31
UBXN11-215ENST00000494942 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBXN11-215ENST00000494942 TRIM75PA6NK02 468 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 NPHP1O15259 732 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 CYP7A1P22680 504 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 TNKSO95271 1327 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 VWA3AA6NCI4 1184 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 EFCAB8A8MWE9 144 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 URI1O94763 535 aaPredicted RBP16.98■□□□□ 0.31
UBXN11-215ENST00000494942 ARHGAP29Q52LW3 1261 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
UBXN11-215ENST00000494942 PDILTQ8N807 584 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 TC2NQ8N9U0 490 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 OXER1Q8TDS5 423 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 CCDC87Q9NVE4 849 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
UBXN11-215ENST00000494942 MAGEB6P1A0A0J9YX57 407 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 FAM193AP78312 1265 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 CDC5LQ99459 802 aaKnown RBP16.97■□□□□ 0.31
UBXN11-215ENST00000494942 ZNF446Q9NWS9 450 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 MINDY4BA8MYZ0 360 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
UBXN11-215ENST00000494942 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
UBXN11-215ENST00000494942 KRT2P35908 639 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 CHRNDQ07001 517 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 GOLGA8FQ08AF8 430 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 GOLGA8DPQ0D2H9 430 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 NR1I3Q14994 352 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 LRRN4CLQ8ND94 238 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 FERMT2Q96AC1 680 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 PHF20Q9BVI0 1012 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
UBXN11-215ENST00000494942 RBM28Q9NW13 759 aaKnown RBP16.97■□□□□ 0.31
UBXN11-215ENST00000494942 MYH6P13533 1939 aa16.97■□□□□ 0.31
UBXN11-215ENST00000494942 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 A0A1B0GTH6 734 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 SLFN14P0C7P3 912 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 CALM1P0DP23 149 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 CALM2P0DP24 149 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 CALM3P0DP25 149 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 INTS5Q6P9B9 1019 aaKnown RBP16.96■□□□□ 0.31
UBXN11-215ENST00000494942 LAMB2P55268 1798 aa16.96■□□□□ 0.31
UBXN11-215ENST00000494942 ATP2B1P20020 1258 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 CASQ1P31415 396 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 CLCN6P51797 869 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 ZNF827Q17R98 1081 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms