RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SMCR8Q8TEV9 937 aaPredicted RBP14.2□□□□□ -0.14
VTI1A-208ENST00000494728 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 ZBTB21Q9ULJ3 1066 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 A0A0G2JMZ2 1700 aa14.19□□□□□ -0.14
VTI1A-208ENST00000494728 CHGBP05060 677 aa14.19□□□□□ -0.14
VTI1A-208ENST00000494728 ELNP15502 786 aa14.19□□□□□ -0.14
VTI1A-208ENST00000494728 PDE6AP16499 860 aa14.19□□□□□ -0.14
VTI1A-208ENST00000494728 RPAP2Q8IXW5 612 aaPredicted RBP14.19□□□□□ -0.14
VTI1A-208ENST00000494728 CRACR2BQ8N4Y2 399 aaPredicted RBP14.19□□□□□ -0.14
VTI1A-208ENST00000494728 RAET1EQ8TD07 263 aa14.19□□□□□ -0.14
VTI1A-208ENST00000494728 ASCC2Q9H1I8 757 aaPredicted RBP14.19□□□□□ -0.14
VTI1A-208ENST00000494728 FRMPD3Q5JV73 1810 aa14.19□□□□□ -0.14
VTI1A-208ENST00000494728 TCRBV5S4A2TA0A5A2 114 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 ASNSP08243 561 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 FLT3LGP49771 235 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 FAM110CQ1W6H9 321 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 POTEEQ6S8J3 1075 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 KIF1BPQ96EK5 621 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
VTI1A-208ENST00000494728 WDR18Q9BV38 432 aa14.18□□□□□ -0.14
VTI1A-208ENST00000494728 GOLIM4O00461 696 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 TNPO2O14787 897 aaKnown RBP14.17□□□□□ -0.14
VTI1A-208ENST00000494728 IGSF3O75054 1194 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 MS4A1P11836 297 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 CCL5P13501 91 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 BACE1P56817 501 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 MAP3K12Q12852 859 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 HSP90AB4PQ58FF6 505 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
VTI1A-208ENST00000494728 ZNF532Q9HCE3 1301 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 GREB1LQ9C091 1923 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-208ENST00000494728 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 ADCY3O60266 1144 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 HMMRO75330 724 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 GH2P01242 217 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 HLA-DOAP06340 250 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 HOXD10P28358 340 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 SHMT1P34896 483 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 USP5P45974 858 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 PLCD1P51178 756 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 TATDN1Q6P1N9 297 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-208ENST00000494728 CLASRPQ8N2M8 674 aaKnown RBP14.16□□□□□ -0.14
VTI1A-208ENST00000494728 LCORLQ8N3X6 602 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.16□□□□□ -0.14
VTI1A-208ENST00000494728 SDR42E1Q8WUS8 393 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 TBC1D2Q9BYX2 928 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 UNC93B1Q9H1C4 597 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 EHD4Q9H223 541 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 AS3MTQ9HBK9 375 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 TXNRD2Q9NNW7 524 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
VTI1A-208ENST00000494728 MAGEB6P1A0A0J9YX57 407 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-208ENST00000494728 INHAP05111 366 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 SLC9C2Q5TAH2 1124 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 SLAIN1Q8ND83 568 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 P2RX7Q99572 595 aaKnown RBP14.15□□□□□ -0.14
VTI1A-208ENST00000494728 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 EMILIN3Q9NT22 766 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 SERPINB13Q9UIV8 391 aa14.15□□□□□ -0.14
VTI1A-208ENST00000494728 LAMA2P24043 3122 aaKnown RBP14.15□□□□□ -0.14
VTI1A-208ENST00000494728 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-208ENST00000494728 IFIT2P09913 472 aaKnown RBP14.14□□□□□ -0.15
VTI1A-208ENST00000494728 CYP2D6P10635 497 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 GUCY1A2P33402 732 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 GABPAQ06546 454 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 ZYXQ15942 572 aaKnown RBP14.14□□□□□ -0.15
VTI1A-208ENST00000494728 ACER1Q8TDN7 264 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 RNF208Q9H0X6 261 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 BOLA2Q9H3K6 86 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 ARMT1Q9H993 441 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 MORF4L1Q9UBU8 362 aa14.14□□□□□ -0.15
VTI1A-208ENST00000494728 USP17L10C9JJH3 530 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 PRKAB2O43741 272 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 RAB11FIP3O75154 756 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 GJB1P08034 283 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 HOXA7P31268 230 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-208ENST00000494728 GJA8P48165 433 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-208ENST00000494728 HERVK_113P62684 666 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 TRIM32Q13049 653 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 IRF5Q13568 498 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 TTF1Q15361 905 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-208ENST00000494728 SLC44A5Q8NCS7 719 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 PAG1Q9NWQ8 432 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 TMOD4Q9NZQ9 345 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
VTI1A-208ENST00000494728 GJD2Q9UKL4 321 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
VTI1A-208ENST00000494728 ATP5JP18859 108 aa14.12□□□□□ -0.15
VTI1A-208ENST00000494728 ADD2P35612 726 aa14.12□□□□□ -0.15
VTI1A-208ENST00000494728 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-208ENST00000494728 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.154e-7■■■□□ 17.1
VTI1A-208ENST00000494728 CERS3Q8IU89 383 aa14.12□□□□□ -0.15
VTI1A-208ENST00000494728 CLEC10AQ8IUN9 316 aa14.12□□□□□ -0.15
VTI1A-208ENST00000494728 U2AF1L4Q8WU68 220 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms