RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TTC19Q6DKK2 380 aaPredicted RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 MTHFD1LQ6UB35 978 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 TMTC1Q8IUR5 882 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 LMBR1Q8WVP7 490 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 DTNBP1Q96EV8 351 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 KCNMB3Q9NPA1 279 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CABP2Q9NPB3 220 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CTNNAL1Q9UBT7 734 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 DACH1Q9UI36 760 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 TPX2Q9ULW0 747 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 SPG7Q9UQ90 795 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC9Q9Y3X0 531 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 MFAP3LO75121 409 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 FERP16591 822 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 EXOSC10Q01780 885 aaKnown RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 ROR2Q01974 943 aaKnown RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 BLMHQ13867 455 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 WASHC4Q2M389 1173 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 MLKLQ8NB16 471 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 GPATCH3Q96I76 525 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 CRACR2AQ9BSW2 395 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 SLC39A2Q9NP94 309 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 CPSF2Q9P2I0 782 aaKnown RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 H3BQV1 296 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 JAK2O60674 1132 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 LSP1P33241 339 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 ANKRD20A8PQ5CZ79 823 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 IFFO2Q5TF58 517 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 RESP18Q5W5W9 173 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 IQCEQ6IPM2 695 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 CNGA4Q8IV77 575 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 TEX9Q8N6V9 391 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 L3MBTL3Q96JM7 780 aaPredicted RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 LMO7Q8WWI1 1683 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 ZMYM6O95789 1325 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 WDR19Q8NEZ3 1342 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 SH2B2O14492 632 aaPredicted RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 PPP1R37O75864 691 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 MAP4K4O95819 1239 aaPredicted RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 SERPINC1P01008 464 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 FLIIQ13045 1269 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 CFAP100Q494V2 611 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 TTMPQ5BVD1 217 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 NUTM2DQ5VT03 806 aaPredicted RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 CDKAL1Q5VV42 579 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 BZW1Q7L1Q6 419 aaKnown RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 NUTM2AQ8IVF1 878 aaPredicted RBP5.41□□□□□ -1.54
PRKD3-210ENST00000494667 SLC35F6Q8N357 371 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 EHBP1Q8NDI1 1231 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 RASSF8Q8NHQ8 419 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 MYCBPAPQ8TBZ2 947 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 SDF4Q9BRK5 362 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 PLEKHA4Q9H4M7 779 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 TRPC6Q9Y210 931 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 C15orf41Q9Y2V0 281 aa5.41□□□□□ -1.54
PRKD3-210ENST00000494667 TECPR2O15040 1411 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 COL15A1P39059 1388 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 UTYO14607 1347 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 NWD2Q9ULI1 1742 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 EME2A4GXA9 379 aaPredicted RBP5.4□□□□□ -1.54
PRKD3-210ENST00000494667 LRRC10BA6NIK2 292 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 BHMG1C9JSJ3 638 aaPredicted RBP5.4□□□□□ -1.54
PRKD3-210ENST00000494667 NDUFAB1O14561 156 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 LMOD1P29536 600 aaPredicted RBP5.4□□□□□ -1.54
PRKD3-210ENST00000494667 EPHB4P54760 987 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 SLC39A14Q15043 492 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 SGSM1Q2NKQ1 1148 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 G2E3Q7L622 706 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 NCAPG2Q86XI2 1143 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 FNBP4Q8N3X1 1017 aaPredicted RBP5.4□□□□□ -1.54
PRKD3-210ENST00000494667 TRIM58Q8NG06 486 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 BICD1Q96G01 975 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 SLX1AQ9BQ83 275 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 PUF60Q9UHX1 559 aaKnown RBP5.4□□□□□ -1.54
PRKD3-210ENST00000494667 ADAMTS7Q9UKP4 1686 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 CFAP73A6NFT4 308 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 SPTLC2O15270 562 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 TAF5LO75529 589 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 LUC7L3O95232 432 aaKnown RBP5.4□□□□□ -1.54
PRKD3-210ENST00000494667 HOXB7P09629 217 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 PFKFB1P16118 471 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 CDR1P51861 262 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 C1QTNF12Q5T7M4 302 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 LRIG3Q6UXM1 1119 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 IQCKQ8N0W5 287 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 ALS2CR12Q96Q35 445 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 PCDHGC5Q9Y5F6 944 aa5.4□□□□□ -1.54
PRKD3-210ENST00000494667 MROH7-TTC4A0A0A0MT08 1334 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 NWD1Q149M9 1564 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 GPR75-ASB3A0A0A6YYF3 556 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 HMGB1P1B2RPK0 211 aaPredicted RBP5.4□□□□□ -1.55
PRKD3-210ENST00000494667 APBB1O00213 710 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 ELL2O00472 640 aaPredicted RBP5.4□□□□□ -1.55
PRKD3-210ENST00000494667 MAFGO15525 162 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 WFS1O76024 890 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 NPTXRO95502 500 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 VIMP08670 466 aaKnown RBP5.4□□□□□ -1.55
PRKD3-210ENST00000494667 FAM163BP0C2L3 166 aa5.4□□□□□ -1.55
PRKD3-210ENST00000494667 MORC3Q14149 939 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms