RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 STK11IPQ8N1F8 1099 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 CHP1Q99653 195 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 ZMYM6O95789 1325 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 ATXN2Q99700 1313 aaKnown RBP11.45□□□□□ -0.58
LINC00488-201ENST00000494582 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 SND1Q7KZF4 910 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00488-201ENST00000494582 TBC1D22AQ8WUA7 517 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 BABAM1Q9NWV8 329 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
LINC00488-201ENST00000494582 USP6P35125 1406 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 TARSL2A2RTX5 802 aaKnown RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 GOLIM4O00461 696 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 SKAP2O75563 359 aaPredicted RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 CASP1P29466 404 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 NF2P35240 595 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 HAND2P61296 217 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 C2orf54Q08AI8 447 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 BIRC2Q13490 618 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 CCDC13Q8IYE1 715 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 CEP120Q8N960 986 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 MLKLQ8NB16 471 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 HAUS7Q99871 368 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 PLCD1P51178 756 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 CCNHP51946 323 aaPredicted RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 NAP1L1P55209 391 aaKnown RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 ANTXR2P58335 489 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 SKOR1P84550 965 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 TBC1D8BQ0IIM8 1120 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 FKBP15Q5T1M5 1219 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 NAA35Q5VZE5 725 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 KLHL10Q6JEL2 608 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 CENPHQ9H3R5 247 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 SLC40A1Q9NP59 571 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 ABHD10Q9NUJ1 306 aa11.44□□□□□ -0.58
LINC00488-201ENST00000494582 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
LINC00488-201ENST00000494582 FOXP2O15409 715 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 POLR2DO15514 142 aaKnown RBP11.43□□□□□ -0.58
LINC00488-201ENST00000494582 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
LINC00488-201ENST00000494582 MRPL12P52815 198 aaKnown RBP11.43□□□□□ -0.58
LINC00488-201ENST00000494582 SMTNP53814 917 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 APBA1Q02410 837 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 CCDC40Q4G0X9 1142 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 HSP90AB3PQ58FF7 597 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 KCTD16Q68DU8 428 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 KRT40Q6A162 431 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 USP49Q70CQ1 688 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 KBTBD3Q8NAB2 608 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
LINC00488-201ENST00000494582 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 DENND2AQ9ULE3 1009 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 UTYO14607 1347 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 PSMD14O00487 310 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 ZEB2O60315 1214 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 KIAA0754O94854 1291 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 IGKV5-2P06315 115 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 RXRAP19793 462 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 CCT6AP40227 531 aaKnown RBP11.43□□□□□ -0.58
LINC00488-201ENST00000494582 SEC24CP53992 1094 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 GUCY1A3Q02108 690 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 DPYDQ12882 1025 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 CDKAL1Q5VV42 579 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 TLDC1Q6P9B6 456 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 MYO1AQ9UBC5 1043 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 DMGDHQ9UI17 866 aaKnown RBP11.43□□□□□ -0.58
LINC00488-201ENST00000494582 SAR1BQ9Y6B6 198 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 ANKARQ7Z5J8 1434 aa11.43□□□□□ -0.58
LINC00488-201ENST00000494582 MAST3O60307 1309 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 EME2A4GXA9 379 aaPredicted RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 M0R2C6 588 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 RNF187Q5TA31 235 aaPredicted RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 B4GALNT4Q76KP1 1039 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 CEP57Q86XR8 500 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 FAM184BQ9ULE4 1060 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 PRC1O43663 620 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 C4AP0C0L4 1744 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 C4BP0C0L5 1744 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 HERVK_113P62684 666 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
LINC00488-201ENST00000494582 PPARAQ07869 468 aa11.42□□□□□ -0.58
LINC00488-201ENST00000494582 SF3B2Q13435 895 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms