RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 USP17L21D6R901 530 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 LDHBP07195 334 aaKnown RBP12.79□□□□□ -0.36
ZIC4-216ENST00000494569 NPR1P16066 1061 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 CHAF1AQ13111 956 aaPredicted RBP12.79□□□□□ -0.36
ZIC4-216ENST00000494569 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 ZSCAN30Q86W11 494 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 FTOQ9C0B1 505 aaKnown RBP eCLIP12.79□□□□□ -0.36
ZIC4-216ENST00000494569 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 GJB4Q9NTQ9 266 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 SLC12A7Q9Y666 1083 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
ZIC4-216ENST00000494569 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 MYL10Q9BUA6 226 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 RXRAP19793 462 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 GSTO1P78417 241 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
ZIC4-216ENST00000494569 SH3RF3Q8TEJ3 882 aaPredicted RBP12.78□□□□□ -0.36
ZIC4-216ENST00000494569 RHBDL3P58872 404 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 TROAPQ12815 778 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
ZIC4-216ENST00000494569 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 CLSTN2Q9H4D0 955 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 CCDC69A6NI79 296 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 PPFIA3O75145 1194 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 CYP2D6P10635 497 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 NOVP48745 357 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 FANCBQ8NB91 859 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 PHKBQ93100 1093 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 ALG1Q9BT22 464 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
ZIC4-216ENST00000494569 SBF1O95248 1867 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 YEATS4O95619 227 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 GUCY1B3Q02153 619 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 KRT40Q6A162 431 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.36
ZIC4-216ENST00000494569 ZNF592Q92610 1267 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.36
ZIC4-216ENST00000494569 NPHP1O15259 732 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 GUCY1A2P33402 732 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 SART3Q15020 963 aaKnown RBP12.77□□□□□ -0.37
ZIC4-216ENST00000494569 RNF214Q8ND24 703 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.37
ZIC4-216ENST00000494569 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 A0A1W2PQD8 194 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 CPLX1O14810 134 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 NR1I2O75469 434 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 DDAH1O94760 285 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 PKN1Q16512 942 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 DZIP1Q86YF9 867 aaKnown RBP12.77□□□□□ -0.37
ZIC4-216ENST00000494569 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
ZIC4-216ENST00000494569 JAG2Q9Y219 1238 aa12.77□□□□□ -0.37
ZIC4-216ENST00000494569 DPEP1P16444 411 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
ZIC4-216ENST00000494569 PTPAQ15257 358 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 RTN1Q16799 776 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 COA1Q9GZY4 146 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 SCN9AQ15858 1988 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 KCNA3P22001 575 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 PDE6BP35913 854 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 AXDND1Q5T1B0 1012 aaPredicted RBP12.76□□□□□ -0.37
ZIC4-216ENST00000494569 NFXL1Q6ZNB6 911 aa12.76□□□□□ -0.37
ZIC4-216ENST00000494569 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 SSRP1Q08945 709 aaKnown RBP12.75□□□□□ -0.37
ZIC4-216ENST00000494569 TBC1D22AQ8WUA7 517 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZIC4-216ENST00000494569 RNF26Q9BY78 433 aaPredicted RBP12.75□□□□□ -0.37
ZIC4-216ENST00000494569 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 ZNF500O60304 480 aaPredicted RBP12.75□□□□□ -0.37
ZIC4-216ENST00000494569 MMP1P03956 469 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 PRELPP51888 382 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 FOSBP53539 338 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
ZIC4-216ENST00000494569 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 DACT1Q9NYF0 836 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 LDHCP07864 332 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 ADALQ6DHV7 355 aa12.75□□□□□ -0.37
ZIC4-216ENST00000494569 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms