RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 FAM221AA4D161 298 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 ERC2O15083 957 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 ITGBL1O95965 494 aaPredicted RBP8.29□□□□□ -1.08
SNX13-210ENST00000494402 S1PR4O95977 384 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 CES1P23141 567 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 TERF1P54274 439 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 TMPRSS15P98073 1019 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 JAKMIP3Q5VZ66 844 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 RUFY4Q6ZNE9 571 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 GET4Q7L5D6 327 aaPredicted RBP8.29□□□□□ -1.08
SNX13-210ENST00000494402 KRT77Q7Z794 578 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 RHPN1Q8TCX5 695 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 TTC1Q99614 292 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 MAN1C1Q9NR34 630 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 ABI2Q9NYB9 513 aaPredicted RBP8.29□□□□□ -1.08
SNX13-210ENST00000494402 PGAP2Q9UHJ9 254 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 PHTF1Q9UMS5 762 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 FAM50BQ9Y247 325 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 DGKBQ9Y6T7 804 aa8.29□□□□□ -1.08
SNX13-210ENST00000494402 BICDL2A1A5D9 508 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 KHNYNO15037 678 aaKnown RBP8.28□□□□□ -1.08
SNX13-210ENST00000494402 SUSD5O60279 629 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 CCT5P48643 541 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 DDX10Q13206 875 aaKnown RBP8.28□□□□□ -1.08
SNX13-210ENST00000494402 SLC9A5Q14940 896 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 FOXB2Q5VYV0 432 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 CLASRPQ8N2M8 674 aaKnown RBP8.28□□□□□ -1.08
SNX13-210ENST00000494402 JARID2Q92833 1246 aaPredicted RBP8.28□□□□□ -1.08
SNX13-210ENST00000494402 CLIP3Q96DZ5 547 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 TM9SF2Q99805 663 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
SNX13-210ENST00000494402 EHMT1Q9H9B1 1298 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 OSGEPQ9NPF4 335 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 ANKRD6Q9Y2G4 727 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 USP20Q9Y2K6 914 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 KCNMB2Q9Y691 235 aa8.28□□□□□ -1.08
SNX13-210ENST00000494402 AGRPO00253 132 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 ENC1O14682 589 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 FIBPO43427 364 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 CILPO75339 1184 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 SNUPNO95149 360 aaKnown RBP8.27□□□□□ -1.09
SNX13-210ENST00000494402 POU3F2P20265 443 aaPredicted RBP8.27□□□□□ -1.09
SNX13-210ENST00000494402 GUCY2CP25092 1073 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 RENBPP51606 427 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 PDE1CQ14123 709 aaPredicted RBP8.27□□□□□ -1.09
SNX13-210ENST00000494402 PTPN21Q16825 1174 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 LONRF1Q17RB8 773 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 GPR158Q5T848 1215 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 VHLLQ6RSH7 139 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 USP7Q93009 1102 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 LIN7BQ9HAP6 207 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
SNX13-210ENST00000494402 CTDP1Q9Y5B0 961 aaPredicted RBP8.27□□□□□ -1.09
SNX13-210ENST00000494402 FRMPD2Q68DX3 1309 aaPredicted RBP8.27□□□□□ -1.09
SNX13-210ENST00000494402 PRSS47A8MTI9 375 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 RRM1P23921 792 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 FSHRP23945 695 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 INPP5BP32019 993 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 CYP2C19P33261 490 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 NEK4P51957 841 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 GPSM2P81274 684 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 GTF2H3Q13889 308 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 GRM3Q14832 879 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 ARHGAP29Q52LW3 1261 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 MZT2AQ6P582 158 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 COG1Q8WTW3 980 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 CDK5RAP3Q96JB5 506 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 TTC14Q96N46 770 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 NECAB3Q96P71 396 aaPredicted RBP8.26□□□□□ -1.09
SNX13-210ENST00000494402 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
SNX13-210ENST00000494402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.26□□□□□ -1.09
SNX13-210ENST00000494402 LATS2Q9NRM7 1088 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 DMTF1Q9Y222 760 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
SNX13-210ENST00000494402 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
SNX13-210ENST00000494402 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 TRBV23-1A0A0A0MS06 115 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 A0A0G2JS52 829 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 FAM83GA6ND36 823 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 PMM2O15305 246 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 SETSIPP0DME0 302 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 PF4V1P10720 104 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 CCND1P24385 295 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 GGCXP38435 758 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 TXLNAP40222 546 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 PCBP1Q15365 356 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNX13-210ENST00000494402 TOMM20Q15388 145 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 LRRFIP1Q32MZ4 808 aaKnown RBP8.25□□□□□ -1.09
SNX13-210ENST00000494402 FAM209AQ5JX71 171 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms