RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PLIN4Q96Q06 1357 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 FGRP09769 529 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 MCM5P33992 734 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 RBM25P49756 843 aaKnown RBP17.59■□□□□ 0.41
ACTB-213ENST00000493945 MAP3K9P80192 1104 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 FGD1P98174 961 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 PRAMEF18Q5VWM3 479 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 BLOC1S2Q6QNY1 142 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 STK11IPQ8N1F8 1099 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 KCNB2Q92953 911 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 KLRG1Q96E93 195 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
ACTB-213ENST00000493945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.413e-22■□□□□ 11.2
ACTB-213ENST00000493945 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 TRAF5O00463 557 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 ITGBL1O95965 494 aaPredicted RBP17.58■□□□□ 0.4
ACTB-213ENST00000493945 SHMT1P34896 483 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 CAP2P40123 477 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 SCYL3Q8IZE3 742 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 JAKMIP1Q96N16 626 aaKnown RBP17.58■□□□□ 0.4
ACTB-213ENST00000493945 TM6SF1Q9BZW5 370 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
ACTB-213ENST00000493945 OTOFQ9HC10 1997 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 NEDD4P46934 1319 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 KDM4AO75164 1064 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 PRDM1O75626 825 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 SEC24BO95487 1268 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 RASA1P20936 1047 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 TFAP4Q01664 338 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 PRKG1Q13976 671 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 NOL9Q5SY16 702 aaKnown RBP17.57■□□□□ 0.4
ACTB-213ENST00000493945 CDAN1Q8IWY9 1227 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 SLC44A5Q8NCS7 719 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.57■□□□□ 0.4
ACTB-213ENST00000493945 TBC1D32Q96NH3 1257 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 DNAJC18Q9H819 358 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 KANSL2Q9H9L4 492 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 ARHGEF10LQ9HCE6 1279 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
ACTB-213ENST00000493945 TMEM88BA6NKF7 163 aa17.56■□□□□ 0.4
ACTB-213ENST00000493945 FAM196BA6NMK8 535 aa17.56■□□□□ 0.4
ACTB-213ENST00000493945 B4E1Z4 1266 aa17.56■□□□□ 0.4
ACTB-213ENST00000493945 CASTP20810 708 aaKnown RBP17.56■□□□□ 0.4
ACTB-213ENST00000493945 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
ACTB-213ENST00000493945 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
ACTB-213ENST00000493945 ZBTB21Q9ULJ3 1066 aa17.56■□□□□ 0.4
ACTB-213ENST00000493945 USP2O75604 605 aaPredicted RBP17.55■□□□□ 0.4
ACTB-213ENST00000493945 GDF11O95390 407 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 ICA1Q05084 483 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 RABEP1Q15276 862 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 DHX32Q7L7V1 743 aaKnown RBP17.55■□□□□ 0.4
ACTB-213ENST00000493945 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 TCP11L1Q9NUJ3 509 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
ACTB-213ENST00000493945 USP17L5A8MUK1 530 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 PHF20L1A8MW92 1017 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 ST18O60284 1047 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 GH2P01242 217 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 TTC14Q96N46 770 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 FEZ1Q99689 392 aa17.54■□□□□ 0.4
ACTB-213ENST00000493945 ABT1Q9ULW3 272 aaKnown RBP17.54■□□□□ 0.4
ACTB-213ENST00000493945 GREB1LQ9C091 1923 aaPredicted RBP17.54■□□□□ 0.4
ACTB-213ENST00000493945 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 IFIT3O14879 490 aaKnown RBP17.53■□□□□ 0.4
ACTB-213ENST00000493945 PRC1O43663 620 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 TTLL1O95922 423 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 AKR1B1P15121 316 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 HUNKP57058 714 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 VGLL4Q14135 290 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 DGKHQ86XP1 1220 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 ERO1BQ86YB8 467 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 MB21D2Q8IYB1 491 aaPredicted RBP17.53■□□□□ 0.4
ACTB-213ENST00000493945 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 SLC10A4Q96EP9 437 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
ACTB-213ENST00000493945 STX8Q9UNK0 236 aa17.53■□□□□ 0.4
ACTB-213ENST00000493945 INPP5BP32019 993 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 APLP1P51693 650 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 USP14P54578 494 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 PPATQ06203 517 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 WTAPQ15007 396 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 FAM47AQ5JRC9 791 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 IFIT1BQ5T764 474 aaKnown RBP17.52■□□□□ 0.4
ACTB-213ENST00000493945 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 STOX1Q6ZVD7 989 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 HHIPL1Q96JK4 782 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.4
ACTB-213ENST00000493945 TNKSO95271 1327 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 RPS6KB1P23443 525 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 ATP2B2Q01814 1243 aa17.51■□□□□ 0.39
ACTB-213ENST00000493945 EVX2Q03828 476 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms