RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PRKAB2O43741 272 aa27.25■■□□□ 1.95
SNIP1-203ENST00000493916 GDF11O95390 407 aa27.25■■□□□ 1.95
SNIP1-203ENST00000493916 GABPAQ06546 454 aa27.25■■□□□ 1.95
SNIP1-203ENST00000493916 SPP2Q13103 211 aa27.25■■□□□ 1.95
SNIP1-203ENST00000493916 LRRFIP1Q32MZ4 808 aaKnown RBP27.25■■□□□ 1.95
SNIP1-203ENST00000493916 GADL1Q6ZQY3 521 aa27.25■■□□□ 1.95
SNIP1-203ENST00000493916 PROCA1Q8NCQ7 364 aaPredicted RBP27.25■■□□□ 1.95
SNIP1-203ENST00000493916 APPBP2Q92624 585 aa27.25■■□□□ 1.95
SNIP1-203ENST00000493916 PARK7Q99497 189 aaKnown RBP27.25■■□□□ 1.95
SNIP1-203ENST00000493916 IGHDP01880 384 aa27.24■■□□□ 1.95
SNIP1-203ENST00000493916 CD99L2Q8TCZ2 262 aa27.24■■□□□ 1.95
SNIP1-203ENST00000493916 AGTPBP1Q9UPW5 1226 aa27.24■■□□□ 1.95
SNIP1-203ENST00000493916 SHMT1P34896 483 aa27.23■■□□□ 1.95
SNIP1-203ENST00000493916 SHROOM1Q2M3G4 852 aaPredicted RBP27.23■■□□□ 1.95
SNIP1-203ENST00000493916 SH3D19Q5HYK7 790 aa27.23■■□□□ 1.95
SNIP1-203ENST00000493916 C17orf99Q6UX52 265 aa27.23■■□□□ 1.95
SNIP1-203ENST00000493916 SLC4A4Q9Y6R1 1079 aa27.23■■□□□ 1.95
SNIP1-203ENST00000493916 PDE1AP54750 535 aa27.22■■□□□ 1.95
SNIP1-203ENST00000493916 FBXO46Q6PJ61 603 aaPredicted RBP27.22■■□□□ 1.95
SNIP1-203ENST00000493916 OTOP1Q7RTM1 612 aa27.22■■□□□ 1.95
SNIP1-203ENST00000493916 OSBP2Q969R2 916 aa27.22■■□□□ 1.95
SNIP1-203ENST00000493916 STRBPQ96SI9 672 aaKnown RBP27.22■■□□□ 1.95
SNIP1-203ENST00000493916 GH2P01242 217 aa27.21■■□□□ 1.95
SNIP1-203ENST00000493916 CERKLQ49MI3 558 aaPredicted RBP27.21■■□□□ 1.95
SNIP1-203ENST00000493916 DDRGK1Q96HY6 314 aa27.21■■□□□ 1.95
SNIP1-203ENST00000493916 LNPKQ9C0E8 428 aa27.21■■□□□ 1.95
SNIP1-203ENST00000493916 TRIM17Q9Y577 477 aa27.21■■□□□ 1.95
SNIP1-203ENST00000493916 HTTP42858 3142 aa27.2■■□□□ 1.95
SNIP1-203ENST00000493916 CYP2D6P10635 497 aa27.2■■□□□ 1.94
SNIP1-203ENST00000493916 HMGCS2P54868 508 aa27.2■■□□□ 1.94
SNIP1-203ENST00000493916 EVX2Q03828 476 aa27.2■■□□□ 1.94
SNIP1-203ENST00000493916 FSD1Q9BTV5 496 aa27.2■■□□□ 1.94
SNIP1-203ENST00000493916 CYP2C8P10632 490 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 BACE1P56817 501 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 CAP1Q01518 475 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 NUCB1Q02818 461 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 MTMR2Q13614 643 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 ARHGEF6Q15052 776 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 ABCB5Q2M3G0 1257 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 TREML2Q5T2D2 321 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 AMOTL1Q8IY63 956 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 EFCC1Q9HA90 598 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 SWAP70Q9UH65 585 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 CPA4Q9UI42 421 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 HPS5Q9UPZ3 1129 aa27.19■■□□□ 1.94
SNIP1-203ENST00000493916 CCDC85CA6NKD9 419 aa27.18■■□□□ 1.94
SNIP1-203ENST00000493916 LACTBP83111 547 aaPredicted RBP27.18■■□□□ 1.94
SNIP1-203ENST00000493916 C12orf60Q5U649 245 aa27.18■■□□□ 1.94
SNIP1-203ENST00000493916 B4GALNT3Q6L9W6 998 aa27.18■■□□□ 1.94
SNIP1-203ENST00000493916 GIMAP6Q6P9H5 292 aa27.18■■□□□ 1.94
SNIP1-203ENST00000493916 CHD1LQ86WJ1 897 aa27.18■■□□□ 1.94
SNIP1-203ENST00000493916 BAZ2AQ9UIF9 1905 aaKnown RBP27.18■■□□□ 1.94
SNIP1-203ENST00000493916 C19orf81C9J6K1 198 aa27.17■■□□□ 1.94
SNIP1-203ENST00000493916 USP17L10C9JJH3 530 aa27.17■■□□□ 1.94
SNIP1-203ENST00000493916 GPAA1O43292 621 aa27.17■■□□□ 1.94
SNIP1-203ENST00000493916 GNAT2P19087 354 aa27.17■■□□□ 1.94
SNIP1-203ENST00000493916 PNMA3Q9UL41 463 aa27.17■■□□□ 1.94
SNIP1-203ENST00000493916 USP17L12C9JPN9 530 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 USP17L21D6R901 530 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 M0R2C6 588 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 BCRP11274 1271 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 PABPC4Q13310 644 aaKnown RBP eCLIP27.16■■□□□ 1.94
SNIP1-203ENST00000493916 KIF22Q14807 665 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 CTR9Q6PD62 1173 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 EVI5LQ96CN4 794 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 CABP5Q9NP86 173 aa27.16■■□□□ 1.94
SNIP1-203ENST00000493916 ARPP21Q9UBL0 812 aaPredicted RBP27.16■■□□□ 1.94
SNIP1-203ENST00000493916 GSG1L2A8MUP6 293 aa27.15■■□□□ 1.94
SNIP1-203ENST00000493916 IRX6P78412 446 aaPredicted RBP27.15■■□□□ 1.94
SNIP1-203ENST00000493916 ZMYM1Q5SVZ6 1142 aa27.15■■□□□ 1.94
SNIP1-203ENST00000493916 TMOD4Q9NZQ9 345 aa27.15■■□□□ 1.94
SNIP1-203ENST00000493916 PTPN22Q9Y2R2 807 aa27.15■■□□□ 1.94
SNIP1-203ENST00000493916 RAB3GAP1Q15042 981 aa27.14■■□□□ 1.94
SNIP1-203ENST00000493916 TICAM2Q86XR7 235 aa27.14■■□□□ 1.94
SNIP1-203ENST00000493916 SLC44A5Q8NCS7 719 aa27.14■■□□□ 1.94
SNIP1-203ENST00000493916 DYNLL2Q96FJ2 89 aa27.14■■□□□ 1.94
SNIP1-203ENST00000493916 CYP2D7A0A087X1C5 515 aa27.13■■□□□ 1.93
SNIP1-203ENST00000493916 GNRH1P01148 92 aa27.13■■□□□ 1.93
SNIP1-203ENST00000493916 GUCY1A2P33402 732 aa27.13■■□□□ 1.93
SNIP1-203ENST00000493916 SBK1Q52WX2 424 aa27.13■■□□□ 1.93
SNIP1-203ENST00000493916 C16orf86Q6ZW13 317 aa27.13■■□□□ 1.93
SNIP1-203ENST00000493916 SMCR8Q8TEV9 937 aaPredicted RBP27.13■■□□□ 1.93
SNIP1-203ENST00000493916 ARHGAP39Q9C0H5 1083 aa27.13■■□□□ 1.93
SNIP1-203ENST00000493916 ZSWIM8A7E2V4 1837 aa27.12■■□□□ 1.93
SNIP1-203ENST00000493916 USP17L2Q6R6M4 530 aa27.12■■□□□ 1.93
SNIP1-203ENST00000493916 OSBPL3Q9H4L5 887 aa27.12■■□□□ 1.93
SNIP1-203ENST00000493916 ROBO3Q96MS0 1386 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 SMIM22K7EJ46 135 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 OSBPP22059 807 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 HOXA7P31268 230 aaPredicted RBP27.11■■□□□ 1.93
SNIP1-203ENST00000493916 TMEM179Q6ZVK1 233 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 PLEKHM2Q8IWE5 1019 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 C12orf42Q96LP6 360 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 SEC62Q99442 399 aaKnown RBP27.11■■□□□ 1.93
SNIP1-203ENST00000493916 KIAA1683Q9H0B3 1180 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 ASCC2Q9H1I8 757 aaPredicted RBP27.11■■□□□ 1.93
SNIP1-203ENST00000493916 EPB41L4AQ9HCS5 686 aaPredicted RBP27.11■■□□□ 1.93
SNIP1-203ENST00000493916 EMILIN3Q9NT22 766 aa27.11■■□□□ 1.93
SNIP1-203ENST00000493916 MYH8P13535 1937 aa27.1■■□□□ 1.93
SNIP1-203ENST00000493916 CDK8P49336 464 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms