RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 EOMESO95936 686 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 HOXA10P31260 410 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-216ENST00000493758 PRAMEF13Q5VWM6 474 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 ZNF746Q6NUN9 644 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-216ENST00000493758 USP48Q86UV5 1035 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 KIAA0825Q8IV33 1275 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 REXO1Q8N1G1 1221 aaKnown RBP7.33□□□□□ -1.24
ITGB1-216ENST00000493758 ACSF2Q96CM8 615 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-216ENST00000493758 LGR6Q9HBX8 967 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 BSDC1Q9NW68 430 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-216ENST00000493758 PODXL2Q9NZ53 605 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 DDX41Q9UJV9 622 aaKnown RBP7.33□□□□□ -1.24
ITGB1-216ENST00000493758 SLITRK5O94991 958 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 HTR3BO95264 441 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 CRKP46108 304 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 OXCT1P55809 520 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 VSIG10LQ86VR7 867 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 SLITRK4Q8IW52 837 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 TNKS2Q9H2K2 1166 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 EHMT1Q9H9B1 1298 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 PCMTD2Q9NV79 361 aa7.32□□□□□ -1.24
ITGB1-216ENST00000493758 CEACAM5P06731 702 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 ZNF865P0CJ78 1059 aaPredicted RBP7.31□□□□□ -1.24
ITGB1-216ENST00000493758 SSTR4P31391 388 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 FBXO27Q8NI29 283 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 CYB5D2Q8WUJ1 264 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 MISP3Q96FF7 219 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 HEXIM2Q96MH2 286 aaKnown RBP7.31□□□□□ -1.24
ITGB1-216ENST00000493758 SPON2Q9BUD6 331 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 ZC3H7BQ9UGR2 993 aaKnown RBP7.31□□□□□ -1.24
ITGB1-216ENST00000493758 CORINQ9Y5Q5 1042 aa7.31□□□□□ -1.24
ITGB1-216ENST00000493758 PLCG1P19174 1290 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 YARSP54577 528 aaKnown RBP7.3□□□□□ -1.24
ITGB1-216ENST00000493758 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
ITGB1-216ENST00000493758 APOBRQ0VD83 1088 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 ZNF394Q53GI3 561 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 LETMD1Q6P1Q0 360 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 NETO1Q8TDF5 533 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 PRDM5Q9NQX1 630 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-216ENST00000493758 REV1Q9UBZ9 1251 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 U3KQE9 123 aa7.3□□□□□ -1.24
ITGB1-216ENST00000493758 MEIS3P2A8K0S8 358 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 RACK1P63244 317 aaKnown RBP7.29□□□□□ -1.24
ITGB1-216ENST00000493758 IFI16Q16666 785 aaKnown RBP7.29□□□□□ -1.24
ITGB1-216ENST00000493758 NFXL1Q6ZNB6 911 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 ZNF654Q8IZM8 581 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 STK11IPQ8N1F8 1099 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 EAF1Q96JC9 268 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-216ENST00000493758 SPATA32Q96LK8 384 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 MIPEPQ99797 713 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 LRRC4CQ9HCJ2 640 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 UBP1Q9NZI7 540 aa7.29□□□□□ -1.24
ITGB1-216ENST00000493758 CLCN7P51798 805 aa7.28□□□□□ -1.24
ITGB1-216ENST00000493758 GMIPQ9P107 970 aa7.28□□□□□ -1.24
ITGB1-216ENST00000493758 CCDC39Q9UFE4 941 aa7.28□□□□□ -1.24
ITGB1-216ENST00000493758 PCDHGB7Q9Y5F8 929 aa7.28□□□□□ -1.24
ITGB1-216ENST00000493758 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
ITGB1-216ENST00000493758 ETV3P41162 512 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 KIR3DL1P43629 444 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 GJA8P48165 433 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 COL9A2Q14055 689 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-216ENST00000493758 MLECQ14165 292 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 NT5DC4Q86YG4 428 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 WFDC3Q8IUB2 231 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 SPACA3Q8IXA5 215 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 FAM181AQ8N9Y4 354 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 FAM13CQ8NE31 585 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 RASGRP4Q8TDF6 673 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 PPP1R13LQ8WUF5 828 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 BRMS1Q9HCU9 246 aa7.27□□□□□ -1.25
ITGB1-216ENST00000493758 COL17A1Q9UMD9 1497 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-216ENST00000493758 TMEM265A0A087WTH1 108 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 TLR3O15455 904 aaKnown RBP7.26□□□□□ -1.25
ITGB1-216ENST00000493758 GRIN3BO60391 1043 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 DNAJA2O60884 412 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 CYP7A1P22680 504 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 ZNF165P49910 485 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 RAD51AP2Q09MP3 1159 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 PLD6Q8N2A8 252 aaKnown RBP7.26□□□□□ -1.25
ITGB1-216ENST00000493758 FBXL18Q96ME1 805 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 DPH2Q9BQC3 489 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-216ENST00000493758 TGIF2Q9GZN2 237 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 ZNRF3Q9ULT6 936 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 PLAGL2Q9UPG8 496 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 PCDHB14Q9Y5E9 798 aa7.26□□□□□ -1.25
ITGB1-216ENST00000493758 ADAMTS4O75173 837 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 WNT11O96014 354 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 IMPDH2P12268 514 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 PRKCQQ04759 706 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 NKPD1Q17RQ9 610 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 SEZ6Q53EL9 994 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 SFRP5Q5T4F7 317 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 XP32Q5T750 250 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 CDCP2Q5VXM1 449 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 MFSD4AQ8N468 514 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 BCL7CQ8WUZ0 217 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-216ENST00000493758 IGSF5Q9NSI5 407 aa7.25□□□□□ -1.25
ITGB1-216ENST00000493758 VAV3Q9UKW4 847 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms