RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PTCH2Q9Y6C5 1203 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 PRKAB2O43741 272 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 TLR2O60603 784 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 NMIQ13287 307 aaPredicted RBP13.9□□□□□ -0.18
CTSA-209ENST00000493522 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 MIGA2Q7L4E1 593 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 SEC62Q99442 399 aaKnown RBP13.9□□□□□ -0.18
CTSA-209ENST00000493522 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
CTSA-209ENST00000493522 A0A0D9SFI3 127 aa13.89□□□□□ -0.19
CTSA-209ENST00000493522 GNRH1P01148 92 aa13.89□□□□□ -0.19
CTSA-209ENST00000493522 SDSP20132 328 aa13.89□□□□□ -0.19
CTSA-209ENST00000493522 PPIL2Q13356 520 aa13.89□□□□□ -0.19
CTSA-209ENST00000493522 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
CTSA-209ENST00000493522 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
CTSA-209ENST00000493522 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
CTSA-209ENST00000493522 FAM196BA6NMK8 535 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 HIP1O00291 1037 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 IRF6O14896 467 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 LACTBP83111 547 aaPredicted RBP13.88□□□□□ -0.19
CTSA-209ENST00000493522 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
CTSA-209ENST00000493522 ZKSCAN4Q969J2 545 aaPredicted RBP13.88□□□□□ -0.19
CTSA-209ENST00000493522 FAM227BQ96M60 508 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
CTSA-209ENST00000493522 DCP1AQ9NPI6 582 aaPredicted RBP13.88□□□□□ -0.19
CTSA-209ENST00000493522 HELLSQ9NRZ9 838 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
CTSA-209ENST00000493522 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 POLR3DP05423 398 aaPredicted RBP13.87□□□□□ -0.19
CTSA-209ENST00000493522 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 GNAT2P19087 354 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 PRMT2P55345 433 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 PPATQ06203 517 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 TICAM2Q86XR7 235 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 AMOTL1Q8IY63 956 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTSA-209ENST00000493522 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 PI4KBQ9UBF8 816 aa13.87□□□□□ -0.19
CTSA-209ENST00000493522 RANBP2P49792 3224 aaKnown RBP13.87□□□□□ -0.19
CTSA-209ENST00000493522 SZT2Q5T011 3432 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 MYCP01106 439 aaPredicted RBP13.86□□□□□ -0.19
CTSA-209ENST00000493522 APPP05067 770 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 CYP2D6P10635 497 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 KCNA4P22459 653 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 TDO2P48775 406 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
CTSA-209ENST00000493522 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 SH3TC2Q8TF17 1288 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 HERC5Q9UII4 1024 aaKnown RBP13.86□□□□□ -0.19
CTSA-209ENST00000493522 CCDC171Q6TFL3 1326 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 MYH4Q9Y623 1939 aa13.86□□□□□ -0.19
CTSA-209ENST00000493522 GSG1L2A8MUP6 293 aa13.85□□□□□ -0.19
CTSA-209ENST00000493522 INPP5BP32019 993 aa13.85□□□□□ -0.19
CTSA-209ENST00000493522 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
CTSA-209ENST00000493522 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
CTSA-209ENST00000493522 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
CTSA-209ENST00000493522 GREB1LQ9C091 1923 aaPredicted RBP13.85□□□□□ -0.19
CTSA-209ENST00000493522 LOC285556D6RIA3 1793 aa13.85□□□□□ -0.19
CTSA-209ENST00000493522 CEP290O15078 2479 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 TBC1D12O60347 775 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTSA-209ENST00000493522 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
CTSA-209ENST00000493522 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
CTSA-209ENST00000493522 NAPBQ9H115 298 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 EHD4Q9H223 541 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 DNAJC18Q9H819 358 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
CTSA-209ENST00000493522 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 USP17L21D6R901 530 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 PDHXO00330 501 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 HOXD10P28358 340 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 PSMC4P43686 418 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 PLCD1P51178 756 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 EVX2Q03828 476 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 GIMAP6Q6P9H5 292 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 C17orf99Q6UX52 265 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
CTSA-209ENST00000493522 CPA4Q9UI42 421 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 RAD50Q92878 1312 aa13.83□□□□□ -0.2
CTSA-209ENST00000493522 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
CTSA-209ENST00000493522 CHMLP26374 656 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
CTSA-209ENST00000493522 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
CTSA-209ENST00000493522 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms