RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 AFMP43652 599 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 ZNF124Q15973 351 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 KCNMB1Q16558 191 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 CDKAL1Q5VV42 579 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 LETMD1Q6P1Q0 360 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 SLC38A3Q99624 504 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 AK5Q9Y6K8 562 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 CNTNAP4Q9C0A0 1308 aa5.98□□□□□ -1.45
PTCD3-218ENST00000493430 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 PRR33A8MZF0 331 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 CST3P01034 146 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-218ENST00000493430 CYP7A1P22680 504 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 GRK4P32298 578 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 CDK8P49336 464 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 NPAS4Q8IUM7 802 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 RIN3Q8TB24 985 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 TRAIPQ9BWF2 469 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 CARS2Q9HA77 564 aaKnown RBP5.97□□□□□ -1.45
PTCD3-218ENST00000493430 ATP13A1Q9HD20 1204 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 SEMA3GQ9NS98 782 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 TACC3Q9Y6A5 838 aa5.97□□□□□ -1.45
PTCD3-218ENST00000493430 DBX1A6NMT0 343 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 GFRA2O00451 464 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 CBX7O95931 251 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 PRAMEF13Q5VWM6 474 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 AGMOQ6ZNB7 445 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 COX4I2Q96KJ9 171 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 FAM84AQ96KN4 292 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 PCDHB5Q9Y5E4 795 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 CAPN6Q9Y6Q1 641 aa5.96□□□□□ -1.46
PTCD3-218ENST00000493430 ZNF503-AS2A6NEH8 195 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 H3BS24 57 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 SEPT6Q14141 434 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 EAPPQ56P03 285 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-218ENST00000493430 THAP5Q7Z6K1 395 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 XAGE3Q8WTP9 111 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 DUSP9Q99956 384 aaKnown RBP5.95□□□□□ -1.46
PTCD3-218ENST00000493430 MIR1-1HGQ9H1L0 117 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 ST14Q9Y5Y6 855 aa5.95□□□□□ -1.46
PTCD3-218ENST00000493430 RLBP1P12271 317 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 GDNFP39905 211 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 KIR3DL1P43629 444 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 LIG3P49916 1009 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 MESP2Q0VG99 397 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 MAP3K11Q16584 847 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 MLANAQ16655 118 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 FYB2Q5VWT5 728 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 UBE2FQ969M7 185 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 CCDC120Q96HB5 630 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 KIRREL1Q96J84 757 aa5.94□□□□□ -1.46
PTCD3-218ENST00000493430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTCD3-218ENST00000493430 ARID1BQ8NFD5 2236 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-218ENST00000493430 ANKRD33BA6NCL7 494 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 PGRP06401 933 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 GLI1P08151 1106 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 PDE4BQ07343 736 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 TSNAXIP1Q2TAA8 658 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 TMEM67Q5HYA8 995 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 DIEXFQ68CQ4 756 aaKnown RBP5.93□□□□□ -1.46
PTCD3-218ENST00000493430 SLC6A19Q695T7 634 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 CDH24Q86UP0 819 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 MRPL41Q8IXM3 137 aaKnown RBP5.93□□□□□ -1.46
PTCD3-218ENST00000493430 BHLHE22Q8NFJ8 381 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-218ENST00000493430 LIN37Q96GY3 246 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-218ENST00000493430 ZSWIM5Q9P217 1185 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
PTCD3-218ENST00000493430 TNK2Q07912 1038 aa5.92□□□□□ -1.46
PTCD3-218ENST00000493430 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
PTCD3-218ENST00000493430 PIWIL2Q8TC59 973 aaKnown RBP5.92□□□□□ -1.46
PTCD3-218ENST00000493430 TMEM87BQ96K49 555 aa5.92□□□□□ -1.46
PTCD3-218ENST00000493430 RNF19AQ9NV58 838 aa5.92□□□□□ -1.46
PTCD3-218ENST00000493430 RB1CC1Q8TDY2 1594 aa5.92□□□□□ -1.46
PTCD3-218ENST00000493430 TFE3P19532 575 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-218ENST00000493430 ETV3P41162 512 aa5.91□□□□□ -1.46
PTCD3-218ENST00000493430 RPL6Q02878 288 aaKnown RBP5.91□□□□□ -1.46
PTCD3-218ENST00000493430 TAF1CQ15572 869 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-218ENST00000493430 MEI1Q5TIA1 1274 aa5.91□□□□□ -1.46
PTCD3-218ENST00000493430 MCATQ8IVS2 390 aaKnown RBP5.91□□□□□ -1.46
PTCD3-218ENST00000493430 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-218ENST00000493430 DPH2Q9BQC3 489 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-218ENST00000493430 C19orf73Q9NVV2 129 aa5.91□□□□□ -1.46
PTCD3-218ENST00000493430 PARP2Q9UGN5 583 aa5.91□□□□□ -1.46
PTCD3-218ENST00000493430 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
PTCD3-218ENST00000493430 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-218ENST00000493430 RAP1GAPP47736 663 aa5.9□□□□□ -1.46
PTCD3-218ENST00000493430 PSMD2Q13200 908 aa5.9□□□□□ -1.46
PTCD3-218ENST00000493430 TMPRSS7Q7RTY8 843 aa5.9□□□□□ -1.46
PTCD3-218ENST00000493430 ALPK1Q96QP1 1244 aa5.9□□□□□ -1.46
PTCD3-218ENST00000493430 NOC4LQ9BVI4 516 aaKnown RBP5.9□□□□□ -1.46
PTCD3-218ENST00000493430 CEP131Q9UPN4 1083 aa5.9□□□□□ -1.46
PTCD3-218ENST00000493430 RAC2P15153 192 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 ST13P50502 369 aaKnown RBP5.89□□□□□ -1.47
PTCD3-218ENST00000493430 DAB2P98082 770 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 PRR23BQ6ZRT6 265 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 SND1Q7KZF4 910 aaKnown RBP eCLIP5.89□□□□□ -1.47
PTCD3-218ENST00000493430 TTC6Q86TZ1 520 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 CCDC84Q86UT8 332 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-218ENST00000493430 PPP1R16BQ96T49 567 aa5.89□□□□□ -1.47
PTCD3-218ENST00000493430 SLAMF8Q9P0V8 285 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms