RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 NACAP1Q9BZK3 213 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-209ENST00000493166 RNF186Q9NXI6 227 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 SAGE1Q9NXZ1 904 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
CLIP2-209ENST00000493166 TESPA1A2RU30 521 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-209ENST00000493166 CETPP11597 493 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 SHMT1P34896 483 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-209ENST00000493166 COL13A1Q5TAT6 717 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-209ENST00000493166 OTUD7BQ6GQQ9 843 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-209ENST00000493166 GINM1Q9NU53 330 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 SWAP70Q9UH65 585 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 KCNH4Q9UQ05 1017 aa15.29■□□□□ 0.04
CLIP2-209ENST00000493166 MYH4Q9Y623 1939 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 USP17L5A8MUK1 530 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 IGF2BP3O00425 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLIP2-209ENST00000493166 CXCL11O14625 94 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 ALDH1A1P00352 501 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
CLIP2-209ENST00000493166 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-209ENST00000493166 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 CWC27Q6UX04 472 aaKnown RBP15.28■□□□□ 0.04
CLIP2-209ENST00000493166 IFNL3Q8IZI9 196 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 BRI3BPQ8WY22 251 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 TBC1D2Q9BYX2 928 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 NAPBQ9H115 298 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 ZBTB21Q9ULJ3 1066 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
CLIP2-209ENST00000493166 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-209ENST00000493166 CCDC171Q6TFL3 1326 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 GH2P01242 217 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 LBX1P52954 281 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
CLIP2-209ENST00000493166 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 SKAP1Q86WV1 359 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 PTPN18Q99952 460 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 AS3MTQ9HBK9 375 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 CABP5Q9NP86 173 aa15.27■□□□□ 0.04
CLIP2-209ENST00000493166 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
CLIP2-209ENST00000493166 SMIM22K7EJ46 135 aa15.26■□□□□ 0.03
CLIP2-209ENST00000493166 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
CLIP2-209ENST00000493166 CDK8P49336 464 aa15.26■□□□□ 0.03
CLIP2-209ENST00000493166 JAG1P78504 1218 aa15.26■□□□□ 0.03
CLIP2-209ENST00000493166 VPS53Q5VIR6 699 aa15.26■□□□□ 0.03
CLIP2-209ENST00000493166 ZNF589Q86UQ0 364 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-209ENST00000493166 ZNF280CQ8ND82 737 aa15.26■□□□□ 0.03
CLIP2-209ENST00000493166 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-209ENST00000493166 BTBD19C9JJ37 291 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 FOXP2O15409 715 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 SPP2Q13103 211 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 FASTKD5Q7L8L6 764 aaKnown RBP15.25■□□□□ 0.03
CLIP2-209ENST00000493166 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-209ENST00000493166 STK11IPQ8N1F8 1099 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 WDR18Q9BV38 432 aa15.25■□□□□ 0.03
CLIP2-209ENST00000493166 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
CLIP2-209ENST00000493166 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
CLIP2-209ENST00000493166 FAM43AQ8N2R8 423 aa15.24■□□□□ 0.03
CLIP2-209ENST00000493166 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
CLIP2-209ENST00000493166 ZCCHC17Q9NP64 241 aaKnown RBP15.24■□□□□ 0.03
CLIP2-209ENST00000493166 AKR1B1P15121 316 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 PPARAQ07869 468 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 MTMR2Q13614 643 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 MOGSQ13724 837 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 TAF1CQ15572 869 aaPredicted RBP15.23■□□□□ 0.03
CLIP2-209ENST00000493166 ALX1Q15699 326 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 TMEM179Q6ZVK1 233 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 ANKRD23Q86SG2 305 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 RUFY2Q8WXA3 655 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 FEZ1Q99689 392 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 CFHR5Q9BXR6 569 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 PRDM10Q9NQV6 1147 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 MGAMO43451 1857 aa15.23■□□□□ 0.03
CLIP2-209ENST00000493166 ZMYM6O95789 1325 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 RAD50Q92878 1312 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 USP17L10C9JJH3 530 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 PDHXO00330 501 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 CHMLP26374 656 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 HMGCS2P54868 508 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 PDE4BQ07343 736 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 CRHR2Q13324 411 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 SEPT2Q15019 361 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 PROCA1Q8NCQ7 364 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-209ENST00000493166 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
CLIP2-209ENST00000493166 FGAP02671 866 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms