RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
PTPN7-216ENST00000492977 NAV1Q8NEY1 1877 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 DDAH1O94760 285 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 POLR3DP05423 398 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-216ENST00000492977 RHBDL3P58872 404 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 KIF23Q02241 960 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-216ENST00000492977 EVX2Q03828 476 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 KRT40Q6A162 431 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 CC2D2BQ6DHV5 1058 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 CRACR2BQ8N4Y2 399 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-216ENST00000492977 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 CDK5RAP2Q96SN8 1893 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 SLX4Q8IY92 1834 aa16.31■□□□□ 0.2
PTPN7-216ENST00000492977 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-216ENST00000492977 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 RTEL1Q9NZ71 1219 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 DEXIO95424 95 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 FKBP1AP62942 108 aaKnown RBP16.3■□□□□ 0.2
PTPN7-216ENST00000492977 TROAPQ12815 778 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 C7orf43Q8WVR3 580 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 ANKS1AQ92625 1134 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 PGBD1Q96JS3 809 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 AIFM3Q96NN9 605 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-216ENST00000492977 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 DAGLAQ9Y4D2 1042 aa16.3■□□□□ 0.2
PTPN7-216ENST00000492977 FLT1P17948 1338 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 CHRNA5P30532 468 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 TFAP4Q01664 338 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 CERS5Q8N5B7 392 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
PTPN7-216ENST00000492977 YEATS4O95619 227 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN7-216ENST00000492977 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-216ENST00000492977 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
PTPN7-216ENST00000492977 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 HHIPL2Q6UWX4 724 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-216ENST00000492977 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 MRIQ9BWK5 157 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 POLR3EQ9NVU0 708 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
PTPN7-216ENST00000492977 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
PTPN7-216ENST00000492977 DDX60LQ5H9U9 1706 aaKnown RBP16.27■□□□□ 0.2
PTPN7-216ENST00000492977 PRPF3O43395 683 aaKnown RBP16.27■□□□□ 0.2
PTPN7-216ENST00000492977 PLCD1P51178 756 aa16.27■□□□□ 0.2
PTPN7-216ENST00000492977 AKAP17AQ02040 695 aaKnown RBP16.27■□□□□ 0.2
PTPN7-216ENST00000492977 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
PTPN7-216ENST00000492977 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.2
PTPN7-216ENST00000492977 MAP3K14Q99558 947 aa16.27■□□□□ 0.2
PTPN7-216ENST00000492977 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
PTPN7-216ENST00000492977 RBSNQ9H1K0 784 aa16.27■□□□□ 0.2
PTPN7-216ENST00000492977 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.2
PTPN7-216ENST00000492977 SAP30BPQ9UHR5 308 aaKnown RBP16.27■□□□□ 0.2
PTPN7-216ENST00000492977 MYH1P12882 1939 aa16.27■□□□□ 0.19
PTPN7-216ENST00000492977 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 NMT2O60551 498 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 LIG1P18858 919 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 FUT2Q10981 343 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
PTPN7-216ENST00000492977 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN7-216ENST00000492977 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 DEFB132Q7Z7B7 95 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 LINC00301Q8NCQ3 95 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
PTPN7-216ENST00000492977 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN7-216ENST00000492977 MMP1P03956 469 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 XBP1P17861 261 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 SLC4A8Q2Y0W8 1093 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 TMTC3Q6ZXV5 915 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 TEKT1Q969V4 418 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPN7-216ENST00000492977 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 DBNDD1Q9H9R9 158 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 IL17RBQ9NRM6 502 aa16.26■□□□□ 0.19
PTPN7-216ENST00000492977 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
PTPN7-216ENST00000492977 MYH6P13533 1939 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms