RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 KNSTRNQ9Y448 316 aa4.88□□□□□ -1.63
BRCA1-220ENST00000492859 AFG3L2Q9Y4W6 797 aa4.88□□□□□ -1.63
BRCA1-220ENST00000492859 SQORQ9Y6N5 450 aa4.88□□□□□ -1.63
BRCA1-220ENST00000492859 BRD4O60885 1362 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-220ENST00000492859 USP31Q70CQ4 1352 aa4.88□□□□□ -1.63
BRCA1-220ENST00000492859 RASA4BC9J798 803 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 RTCAO00442 366 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PLOD3O60568 738 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 SKAP2O75563 359 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 HSPA5P11021 654 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 CAPN3P20807 821 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 GRK2P25098 689 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ALDH1B1P30837 517 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 GALNSP34059 522 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 KCNC4Q03721 635 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 DSC3Q14574 896 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 OCLNQ16625 522 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 MAP7D1Q3KQU3 841 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 FILIP1LQ4L180 1135 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 CFAP58Q5T655 872 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ISM2Q6H9L7 571 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 LLGL2Q6P1M3 1020 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 LRP10Q7Z4F1 713 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ANKMY2Q8IV38 441 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 DZIP1LQ8IYY4 767 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PXYLP1Q8TE99 480 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 HNRNPLLQ8WVV9 542 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 SPIRE2Q8WWL2 714 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 C1orf74Q96LT6 269 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 RMDN2Q96LZ7 410 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 NLRP3Q96P20 1036 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 SARGQ9BW04 601 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 TMEM134Q9H6X4 195 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 TRPV5Q9NQA5 729 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 HERC5Q9UII4 1024 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 FBXL5Q9UKA1 691 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 BLOC1S6Q9UL45 172 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PCDHB15Q9Y5E8 787 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 SYNDIG1LA6NDD5 238 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 C2orf81A6NN90 581 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 USP17L5A8MUK1 530 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 VSTM5A8MXK1 200 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 WASLO00401 505 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 APAF1O14727 1248 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 MUSKO15146 869 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 GFPT2O94808 682 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 SLC4A1P02730 911 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 CTNNA1P35221 906 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ITGAEP38570 1179 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 GUCY2FP51841 1108 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 RBM6P78332 1123 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PLIN5Q00G26 463 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 STK3Q13188 491 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 TBX2Q13207 712 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PIN1Q13526 163 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ELF2Q15723 593 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 TTC31Q49AM3 519 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PREPLQ4J6C6 727 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 C10orf76Q5T2E6 689 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 FAAH2Q6GMR7 532 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 RSBN1LQ6PCB5 846 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 IGF2-ASQ6U949 168 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 NLRP13Q86W25 1043 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PLEKHM2Q8IWE5 1019 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 SIX5Q8N196 739 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 NKAPQ8N5F7 415 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 LSMEM1Q8N8F7 131 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PI4K2BQ8TCG2 481 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 BRSK1Q8TDC3 778 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 STON2Q8WXE9 905 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 MAML1Q92585 1016 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 GPRASP2Q96D09 838 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 RBM18Q96H35 190 aaKnown RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 UIMC1Q96RL1 719 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 TCHPQ9BT92 498 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 PRKD2Q9BZL6 878 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 CYP4F11Q9HBI6 524 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 KIAA1586Q9HCI6 787 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 FANCFQ9NPI8 374 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ANKEF1Q9NU02 776 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 EXOC1Q9NV70 894 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 CXXC1Q9P0U4 656 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-220ENST00000492859 CEP72Q9P209 647 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 ZNF112Q9UJU3 913 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 NOD1Q9Y239 953 aa4.87□□□□□ -1.63
BRCA1-220ENST00000492859 TMCO5BA8MYB1 307 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 TLL1O43897 1013 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 MTRF1O75570 445 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 KRT38O76015 456 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 CNOT4O95628 575 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 SSBP05455 408 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 SFTPCP11686 197 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 HSPA4P34932 840 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 KRT20P35900 424 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 STAT3P40763 770 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 NFKB2Q00653 900 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 LMNB2Q03252 620 aa4.86□□□□□ -1.63
BRCA1-220ENST00000492859 PTPN12Q05209 780 aaKnown RBP4.86□□□□□ -1.63
BRCA1-220ENST00000492859 APOBRQ0VD83 1088 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms